Ben Cox

Ben Cox

Position: Professor of Biomedical Acoustics
Email: b.cox@ucl.ac.uk
Room: Malet Place Engineering Building, 3.03
Address: Department of Medical Physics and Biomedical Engineering
University College London
Malet Place Engineering Building
Gower Street, London, WC1E 6BT

About

Ben’s research interests are principally numerical modelling of acoustics, and image reconstruction in photoacoustic imaging and biomedical ultrasound. He is lectures on the principles of biomedical ultrasound.

Journal Publications

1.

A. Stanziola, S. R. Arridge, B. T. Cox, B. E. Treeby

A learned Born series for highly-scattering media Journal Article

In: JASA Express Letters, 3 (5), pp. 052401, 2023.

Links | BibTeX

2.

S. Rajagopal, T. J. Allen, M. Berendt, D. Lin, S. Alam, D. J. Richardson, B. T. Cox

The effect of source backing materials and excitation pulse durations on laser-generated ultrasound waveforms Journal Article

In: J. Acoust. Soc. Am., 153 (5), pp. 2649, 2023.

Links | BibTeX

3.

A. Stanziola, S. R. Arridge, B. T. Cox, B. E. Treeby

j-Wave: An open-source differentiable wave simulator Journal Article

In: SoftwareX, 22 , pp. 101338, 2023.

Abstract | Links | BibTeX

4.

J. Gröhl, L. Hacker, B. T. Cox, K. Dreher, S. Morscher, A. Rakotondrainibe, F. Varray, L. Yip, W. Vogt, S. Bohndiek, IPASC

The IPASC data format: A consensus data format for photoacoustic imaging Journal Article

In: Photoacoustics, 26 , pp. 100339, 2022.

Abstract | Links | BibTeX

5.

F. Lucka, M. Perez Liva, B. E. Treeby, B. T. Cox

High resolution 3D ultrasonic breast imaging by time-domain full waveform inversion Journal Article

In: Inverse Problems, 38 (2), pp. 025008, 2022.

Links | BibTeX

6.

M. Bakaric, P. Miloro, A. Javaherian, B. T. Cox, B. E. Treeby, M. D. Brown

Measurement of the ultrasound attenuation and dispersion in 3D-printed photopolymer materials from 1 to 3.5 MHz Journal Article

In: J. Acoust. Soc. Am., 150 (4), pp. 2798-2805, 2021.

Links | BibTeX

7.

A. Javaherian, B. T. Cox

Ray-based inversion accounting for scattering for biomedical ultrasound tomography Journal Article

In: Inverse Problems, 37 (11), pp. 115003, 2021.

Links | BibTeX

8.

A. Stanziola, S. R. Arridge, B. T. Cox, B. E. Treeby

A Helmholtz equation solver using unsupervised learning: Application to transcranial ultrasound Journal Article

In: J. Comput. Phys., 441 , pp. 110430, 2021.

Links | BibTeX

9.

M. Bakaric, P. Fromme, A. Hurrell, S. Rajagopal, P. Miloro, B. Zeqiri, B. T. Cox, B. E. Treeby

Measurement of the temperature-dependent output of lead zirconate titanate transducers Journal Article

In: Ultrasonics, 114 , pp. 106378, 2021.

Links | BibTeX

10.

S. Rajagopal, B. T. Cox

Modelling laser ultrasound waveforms: The effect of varying pulse duration and material properties Journal Article

In: Journal of the Acoustical Society of America, 149 (3), pp. 2040-2054, 2021.

Abstract | Links | BibTeX

11.

S. Kaupinmäki, B. T. Cox, S. R. Arridge, C. Baker, D. Sinden, B. Zeqiri

Pyroelectric ultrasound sensor model: directional response Journal Article

In: Measurement Science and Technology, 32 , pp. 035106, 2021.

Links | BibTeX

12.

K. Pham, S. Noimark, N. Huynh, E. Z. Zhang, F. Kuklis, J. Jaros, A. E. Desjardins, B. T. Cox, P. C. Beard

Broadband All-Optical Plane-Wave Ultrasound Imaging System Based on a Fabry–Perot Scanner Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 68 (4), pp. 1007-1016, 2021.

Abstract | Links | BibTeX

13.

B. E. Treeby, E. S. Wise, F. Kuklis, J. Jaros, B. T. Cox

Nonlinear ultrasound simulation in an axisymmetric coordinate system using a k-space pseudospectral method Journal Article

In: J. Acoust. Soc. Am., 148 (4), pp. 2288-2300, 2020.

Links | BibTeX

14.

E. S. Wise, J. Jaros, B. T. Cox, B. E. Treeby

Pseudospectral Time-Domain (PSTD) Methods for the Wave Equation: Realizing Boundary Conditions with Discrete Sine and Cosine Transforms Journal Article

In: Journal of Theoretical and Computational Acoustics, pp. 2050021, 2020.

Links | BibTeX

15.

A. Javaherian, F. Lucka, B. T. Cox

Refraction-corrected ray-based inversion for three-dimensional ultrasound tomography of the breast Journal Article

In: Inverse Problems, 36 , pp. 125010, 2020.

Links | BibTeX

16.

A. Hauptmann, B. T. Cox

Deep learning in photoacoustic tomography: current approaches and future directions Journal Article

In: Journal of Biomedical Optics, 25 (11), pp. 112903, 2020.

Links | BibTeX

17.

C. Bench, A. Hauptmann, B. T. Cox

Toward accurate quantitative photoacoustic imaging: learning vascular blood oxygen saturation in three dimensions Journal Article

In: J. Biomed. Opt., 25 (8), pp. 085003, 2020.

Links | BibTeX

18.

S. Rajagopal, B. T. Cox

100 MHz bandwidth planar laser-generated ultrasound source for hydrophone calibration Journal Article

In: Ultrasonics, 108 , pp. 106218, 2020.

Links | BibTeX

19.

M. D. Brown, B. T. Cox, B. E. Treeby

Stackable acoustic holograms Journal Article

In: Appl. Phys. Lett., 116 , pp. 261901, 2020.

Links | BibTeX

20.

P. Patel, M. Roberts, B. T. Cox

Ultrasound Tomography (UST): a potential new breast screening modality? Journal Article

In: Acoustics Bulletin, 45 (2), pp. 51-55, 2020.

Links | BibTeX

21.

M. Bakaric, P. Miloro, B. Zeqiri, B. T. Cox, B. E. Treeby

The effect of curing temperature and time on the acoustic and optical properties of PVCP Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 67 (3), pp. 505-512, 2020.

Links | BibTeX

22.

D. R. Ramasawmy, B. T. Cox, B. E. Treeby

ElasticMatrix: A MATLAB toolbox for anisotropic elastic wave propagation in layered media Journal Article

In: SoftwareX, 11 , pp. 100397, 2020.

Links | BibTeX

23.

R. Hochuli, L. An, P. C. Beard, B. T. Cox

Estimating blood oxygenation from photoacoustic images: can a simple linear spectroscopic inversion ever work? Journal Article

In: J. Biomed. Opt., 24 (12), pp. 121914, 2019.

Links | BibTeX

24.

N. Huynh, F. Lucka, E. Z. Zhang, M. M. Betcke, S. R. Arridge, P. C. Beard, B. T. Cox

Single-pixel camera photoacoustic tomography Journal Article

In: J. Biomed. Opt., 24 (12), pp. 121907, 2019.

Links | BibTeX

25.

E. S. Wise, B. T. Cox, J. Jaros, B. E. Treeby

Representing arbitrary acoustic source and sensor distributions in Fourier collocation methods Journal Article

In: J. Acoust. Soc. Am., 146 (1), pp. 278-288, 2019.

Links | BibTeX

26.

M. D. Brown, E. Z. Zhang, B. E. Treeby, P. C. Beard, B. T. Cox

Reverberant cavity photoacoustic imaging Journal Article

In: Optica, 6 (6), pp. 821-822, 2019.

Links | BibTeX

27.

B. E. Treeby, J. Jaros, E. Martin, B. T. Cox

From biology to bytes: Predicting the path of ultrasound waves through the human body Journal Article

In: Acoustics Today, 15 (2), pp. 36-44, 2019.

Links | BibTeX

28.

D. R. Ramasawmy, E. Martin, J. A. Guggenheim, E. Z. Zhang, P. C. Beard, B. E. Treeby, B. T. Cox

Analysis of the Directivity of Glass-Etalon Fabry-Perot Ultrasound Sensors Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 66 (9), pp. 1504-1513, 2019.

Links | BibTeX

29.

S. Powell, B. T. Cox, S. R. Arridge

A pseudospectral method for solution of the radiative transport equation Journal Article

In: J. Comp. Phys., 384 , pp. 376-382, 2019.

Links | BibTeX

30.

E. S. Wise, B. T. Cox, B. E. Treeby

Bandwidth-based mesh adaptation in multiple dimensions Journal Article

In: J. Comp. Phys., 371 , pp. 651-662, 2018.

Links | BibTeX

31.

F. Lucka, N. Huynh, M. M. Betcke, E. Z. Zhang, P. C. Beard, B. T. Cox, S. R. Arridge

Enhancing Compressed Sensing 4D Photoacoustic Tomography by Simultaneous Motion Estimation Journal Article

In: SIAM J. Imag. Sci., 11 (4), pp. 2224-2253, 2018.

Links | BibTeX

32.

B. E. Treeby, F. Lucka, E. Martin, B. T. Cox

Equivalent-source acoustic holography for projecting measured ultrasound fields through complex media Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 65 (10), pp. 1857-1864, 2018.

Links | BibTeX

33.

J. Tick, A. Pulkkinen, F. Lucka, R. Ellwood, B. T. Cox, J. Kaipio, S. R. Arridge, T. Tarvainen

Three dimensional photoacoustic tomography in Bayesian framework Journal Article

In: J. Acoust. Soc. Am., 144 (4), pp. 2061-2071, 2018.

Links | BibTeX

34.

B. E. Treeby, E. S. Wise, B. T. Cox

Nonstandard Fourier Pseudospectral Time Domain (PSTD) Schemes for Partial Differential Equations Journal Article

In: Commun. Comput. Phys., 24 (3), pp. 623-634, 2018.

Links | BibTeX

35.

S. Rajagopal, T. Sainsbury, B. E. Treeby, B. T. Cox

Laser generated ultrasound sources using carbon-polymer nanocomposites for high frequency metrology Journal Article

In: J. Acoust. Soc. Am., 144 (2), pp. 584-597, 2018.

Links | BibTeX

36.

L. An, B. T. Cox

Estimating relative chromophore concentrations from multiwavelength photoacoustic images using independent component analysis Journal Article

In: J. Biomed. Opt., 23 (7), pp. 076007, 2018.

Links | BibTeX

37.

A. Hauptmann, F. Lucka, M. M. Betcke, N. Huynh, J. Adler, B. T. Cox, P. C. Beard, S. Ourselin, S. R. Arridge

Model-Based Learning for Accelerated, Limited-View 3-D Photoacoustic Tomography Journal Article

In: IEEE Trans. Med. Imag., 37 (6), pp. 1382-1393, 2018.

Links | BibTeX

38.

M. Bakaric, E. Martin, P. S. Georgiou, B. T. Cox, H. Payne, B. E. Treeby

Experimental study of beam distortion due to fiducial markers during salvage HIFU in the prostate Journal Article

In: Journal of Therapeutic Ultrasound, 6 (1), pp. 1-12, 2018.

Links | BibTeX

39.

B. E. Treeby, J. Budisky, E. S. Wise, J. Jaros, B. T. Cox

Rapid calculation of acoustic fields from arbitrary continuous-wave sources Journal Article

In: J. Acoust. Soc. Am., 143 (1), pp. 529-537, 2018.

Links | BibTeX

40.

M. Fonseca, L. An, P. C. Beard, B. T. Cox

Sulfates as chromophores for multiwavelength photoacoustic imaging phantoms Journal Article

In: J. Biomed. Opt., 22 (12), pp. 125007, 2017.

Links | BibTeX

41.

M. D. Brown, B. T. Cox, B. E. Treeby

Design of multi-frequency acoustic kinoforms Journal Article

In: Appl. Phys. Lett., 111 (24), pp. 244101, 2017.

Links | BibTeX

42.

L. An, T. Saratoon, M. Fonseca, R. Ellwood, B. T. Cox

Statistical independence in nonlinear model-based inversion for quantitative photoacoustic tomography Journal Article

In: Biomed. Opt. Exp., 8 (11), pp. 5297-5310, 2017.

Links | BibTeX

43.

E. S. Wise, B. T. Cox, B. E. Treeby

Mesh density functions based on local bandwidth applied to moving mesh methods Journal Article

In: Commun. Comput. Phys., 22 (5), pp. 1286-1308, 2017.

Links | BibTeX

44.

M. M. Betcke, B. T. Cox, N. Huynh, E. Z. Zhang, P. C. Beard, S. R. Arridge

Acoustic Wave Field Reconstruction From Compressed Measurements With Application in Photoacoustic Tomography Journal Article

In: IEEE Trans. Comp. Imag., 3 (4), pp. 710-721, 2017.

Links | BibTeX

45.

J. L. Robertson, B. T. Cox, J. Jaros, B. E. Treeby

Accurate simulation of transcranial ultrasound propagation for ultrasonic neuromodulation and stimulation Journal Article

In: J. Acoust. Soc. Am., 141 (3), pp. 1726-1738, 2017.

Links | BibTeX

46.

M. Perez Liva, J. L. Herraiz, J. M. Udias, E. Miller, B. T. Cox, B. E. Treeby

Time domain reconstruction of sound speed and attenuation in ultrasound computed tomography using full wave inversion Journal Article

In: J. Acoust. Soc. Am., 141 (3), pp. 1595-1604, 2017.

Links | BibTeX

47.

J. L. Robertson, E. Martin, B. T. Cox, B. E. Treeby

Sensitivity of simulated transcranial ultrasound fields to acoustic medium property maps Journal Article

In: Phys. Med. Biol., 62 (7), pp. 2559-2580, 2017.

Links | BibTeX

48.

M. D. Brown, D. I. Nikitichev, B. E. Treeby, B. T. Cox

Generating arbitrary ultrasound fields with tailored optoacoustic surface profiles Journal Article

In: Appl. Phys. Lett., 110 (9), pp. 094102, 2017.

Links | BibTeX

49.

R. Ellwood, O. Ogunlade, E. Z. Zhang, P. C. Beard, B. T. Cox

Photoacoustic tomography using orthogonal Fabry–Pérot sensors Journal Article

In: J. Biomed. Opt., 22 (4), pp. 041009, 2016.

Links | BibTeX

50.

S. R. Arridge, P. C. Beard, M. M. Betcke, B. T. Cox, N. Huynh, F. Lucka, O. Ogunlade, E. Z. Zhang

Accelerated high-resolution photoacoustic tomography via compressed sensing Journal Article

In: Phys. Med. Biol., 61 , pp. 8908–8940, 2016.

Links | BibTeX

51.

R. Hochuli, S. Powell, S. R. Arridge, B. T. Cox

Quantitative photoacoustic tomography using forward and adjoint Monte Carlo models of radiance Journal Article

In: J. Biomed. Opt., 21 (12), pp. 126004, 2016.

Links | BibTeX

52.

S. R. Arridge, M. M. Betcke, B. T. Cox, F. Lucka, B. E. Treeby

On the adjoint operator in photoacoustic tomography Journal Article

In: Inv. Problems, 32 (11), pp. 115012, 2016.

Links | BibTeX

53.

A. Pulkkinen, B. T. Cox, S. R. Arridge, H. Goh, J. Kaipio, T. Tarvainen

Direct Estimation of Optical Parameters From Photoacoustic Time Series in Quantitative Photoacoustic Tomography Journal Article

In: IEEE Trans. Med. Imag., 35 (11), pp. 2497-2508, 2016.

Links | BibTeX

54.

M. Fonseca, B. Zeqiri, P. C. Beard, B. T. Cox

Characterisation of a phantom for multiwavelength quantitative photoacoustic imaging Journal Article

In: Phys. Med. Biol., 61 , pp. 4950-4973, 2016.

Links | BibTeX

55.

M. D. Brown, J. Jaros, B. T. Cox, B. E. Treeby

Control of broadband optically generated ultrasound pulses using binary amplitude holograms Journal Article

In: J. Acoust. Soc. Am., 139 (4), pp. 1637–1467, 2016.

Links | BibTeX

56.

N. Huynh, E. Z. Zhang, M. M. Betcke, S. R. Arridge, P. C. Beard, B. T. Cox

Single-pixel optical camera for video rate ultrasonic imaging Journal Article

In: Optica, 3 (1), pp. 26-29, 2016.

Links | BibTeX

57.

E. Malone, S. Powell, B. T. Cox, S. R. Arridge

Reconstruction-classification method for quantitative photoacoustic tomography Journal Article

In: J. Biomed. Opt., 20 (12), pp. 126004, 2015.

Links | BibTeX

58.

A. Pulkkinen, B. T. Cox, S. R. Arridge, J. Kaipio, S. R. Arridge

Quantitative photoacoustic tomography using illuminations from a single direction Journal Article

In: J. Biomed. Opt., 20 (3), pp. 036015, 2015.

Links | BibTeX

59.

A. P. Jathoul, J. Laufer, O. Ogunlade, B. E. Treeby, B. T. Cox, E. Z. Zhang, P. Johnson, A. R. Pizzey, B. Philip, T. Marafioti, M. F. Lythgoe, R. B. Pedley, M. A. Pule, P. C. Beard

Deep in vivo photoacoustic imaging of mammalian tissues using a tyrosinase-based genetic reporter Journal Article

In: Nature Photonics, 9 , pp. 239–-246, 2015.

Links | BibTeX

60.

R. Ellwood, E. Z. Zhang, P. C. Beard, B. T. Cox

Photoacoustic imaging using acoustic reflectors to enhance planar arrays Journal Article

In: J. Biomed. Opt., 19 (12), pp. 126012, 2014.

Links | BibTeX

61.

B. E. Treeby, B. T. Cox

Modeling power law absorption and dispersion in viscoelastic solids using a split-field and the fractional Laplacian Journal Article

In: J. Acoust. Soc. Am., 136 (4), pp. 1499-1510, 2014.

Links | BibTeX

62.

A. Pulkkinen, V. Kolehmainen, J. Kaipio, B. T. Cox, S. R. Arridge, T. Tarvainen

Approximate marginalization of unknown scattering in quantitative photoacoustic tomography Journal Article

In: Inv. Prob. Imag., 8 (3), pp. 811-829, 2014.

Links | BibTeX

63.

A. Pulkkinen, B. T. Cox, S. R. Arridge, J. Kaipio, T. Tarvainen

A Bayesian approach to spectral quantitative photoacoustic tomography Journal Article

In: Inv. Prob., 30 , pp. 065012, 2014.

Links | BibTeX

64.

L. Kunyansky, B. Holman, B. T. Cox

Photoacoustic tomography in a rectangular reflecting cavity Journal Article

In: Inv. Prob., 29 , pp. 125010, 2013.

Links | BibTeX

65.

T. Tarvainen, A. Pulkkinen, B. T. Cox, J. Kaipio, S. R. Arridge

Bayesian Image Reconstruction in Quantitative Photoacoustic Tomography Journal Article

In: IEEE Trans. Med. Imag., 32 (12), pp. 2287-2298, 2013.

Links | BibTeX

66.

T. Saratoon, T. Tarvainen, B. T. Cox, S. R. Arridge

A gradient-based method for quantitative photoacoustic tomography using the radiative transfer equation Journal Article

In: Inv. Prob., 29 , pp. 075006, 2013.

Links | BibTeX

67.

K. Firouzi, B. T. Cox, B. E. Treeby, N. Saffari

A first-order k-space model for elastic wave propagation in heterogeneous media Journal Article

In: J. Acoust. Soc. Am., 132 (3), pp. 1271–1283, 2012.

Links | BibTeX

68.

T. Tarvainen, B. T. Cox, J. Kaipio, S. R. Arridge

Reconstructing absorption and scattering distributions in quantitative photoacoustic tomography Journal Article

In: Inv. Prob., 28 , pp. 084009, 2012.

Links | BibTeX

69.

J. Laufer, P. Johnson, E. Z. Zhang, B. E. Treeby, B. T. Cox, R. B. Pedley, P. C. Beard

In vivo preclinical photoacoustic imaging of tumour vasculature development and therapy Journal Article

In: J. Biomed. Opt., 17 (5), pp. 056016, 2012.

Links | BibTeX

70.

J. Laufer, F. C. Norris, J. Cleary, E. Z. Zhang, B. E. Treeby, B. T. Cox, P. Johnson, P. Scambler, M. F. Lythgoe, P. C. Beard

In vivo photoacoustic imaging of mouse embryos Journal Article

In: J. Biomed. Opt., 17 (6), pp. 061220, 2012.

Links | BibTeX

71.

B. E. Treeby, J. Jaros, A. P. Rendell, B. T. Cox

Modeling nonlinear ultrasound propagation in heterogeneous media with power law absorption using a k-space pseudospectral method Journal Article

In: J. Acoust. Soc. Am., 131 (6), pp. 4324–4336, 2012.

Links | BibTeX

72.

E. Z. Zhang, B. Povazay, J. Laufer, A. Alex, B. Hofer, R. B. Pedley, C. Glittenberg, B. E. Treeby, B. T. Cox, P. C. Beard, W. Drexler

Multimodal photoacoustic and optical coherence tomography scanner using an all optical detection scheme for 3D morphological skin imaging Journal Article

In: Biomed. Opt. Express, 2 (8), pp. 2202–2215, 2011.

Links | BibTeX

73.

P. Shao, B. T. Cox, R. Zemp

Estimating optical absorption, scattering, and Grueneisen distributions with multiple-illumination photoacoustic tomography Journal Article

In: Applied Optics, 50 (19), pp. 3145-3154, 2011.

Links | BibTeX

74.

B. E. Treeby, B. T. Cox

A k-space Green's function solution for acoustic initial value problems in homogeneous media with power law absorption Journal Article

In: J. Acoust. Soc. Am., 129 (6), pp. 3652–3660, 2011.

Links | BibTeX

75.

B. E. Treeby, E. Z. Zhang, A. S. Thomas, B. T. Cox

Measurement of the ultrasound attenuation and dispersion in whole human blood and its components from 0-70 MHz Journal Article

In: Ultrasound Med. Biol., 37 (2), pp. 289–300, 2011.

Links | BibTeX

76.

B. T. Cox, J. Laufer, P. C. Beard

Quantitative Photoacoustic Image Reconstruction using Fluence Dependent Chromophores Journal Article

In: Biomed. Opt. Exp., 1 (1), pp. 201-208, 2010.

Links | BibTeX

77.

B. E. Treeby, B. T. Cox

k-Wave: MATLAB toolbox for the simulation and reconstruction of photoacoustic wave-fields Journal Article

In: J. Biomed. Opt., 15 (2), pp. 021314, 2010.

Links | BibTeX

78.

J. Laufer, B. T. Cox, E. Z. Zhang, P. C. Beard

Quantitative determination of chromophore concentrations from 2D photoacoustic images using a nonlinear model-based inversion scheme Journal Article

In: Applied Optics, 49 (8), pp. 1219-1233, 2010.

Links | BibTeX

79.

B. T. Cox, B. E. Treeby

Artifact trapping during time reversal photoacoustic imaging for acoustically heterogeneous media Journal Article

In: IEEE Trans. Med. Imaging, 29 (2), pp. 387–396, 2010.

Links | BibTeX

80.

B. E. Treeby, B. T. Cox

Modeling power law absorption and dispersion for acoustic propagation using the fractional Laplacian Journal Article

In: J. Acoust. Soc. Am., 127 (5), pp. 2741–2748, 2010.

Links | BibTeX

81.

B. E. Treeby, E. Z. Zhang, B. T. Cox

Photoacoustic tomography in absorbing acoustic media using time reversal Journal Article

In: Inverse Probl., 26 (11), pp. 115003, 2010.

Links | BibTeX

82.

B. E. Treeby, B. T. Cox, E. Z. Zhang, S. K. Patch, P. C. Beard

Measurement of broadband temperature-dependent ultrasonic attenuation and dispersion using photoacoustics Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 56 (8), pp. 1666–1676, 2009.

Links | BibTeX

83.

B. T. Cox, S. R. Arridge, P. C. Beard

Estimating chromophore distributions from multiwavelength photoacoustic images Journal Article

In: J. Opt. Soc. Am. A, 26 (2), pp. 443-455, 2009.

Links | BibTeX

84.

B. T. Cox, P. C. Beard

Photoacoustic tomography with a single detector in a reverberant cavity Journal Article

In: J. Acoust. Soc. Am., 125 (3), pp. 1426-1436, 2008.

Links | BibTeX

85.

B. T. Cox, S. R. Arridge, P. C. Beard

Photoacoustic tomography with a limited-aperture planar sensor and a reverberant cavity Journal Article

In: Inv. Prob., 23 , pp. S95-S112, 2007.

Links | BibTeX

86.

B. T. Cox, S. Kara, S. R. Arridge, P. C. Beard

k-space propagation models for acoustically heterogeneous media: Application to biomedical photoacoustics Journal Article

In: J. Acoust. Soc. Am., 121 (6), pp. 3453–3464, 2007.

Links | BibTeX

87.

B. T. Cox, P. C. Beard

The Frequency-Dependent Directivity of a Planar Fabry-Perot Polymer Film Ultrasound Sensor Journal Article

In: IEEE Trans. Ultra. Ferro. Freq. Cont., 52 (2), pp. 394-404, 2006.

Links | BibTeX

88.

B. T. Cox, S. R. Arridge, K. Koestli, P. C. Beard

Two-dimensional quantitative photoacoustic image reconstruction of absorption distributions in scattering media by use of a simple iterative method Journal Article

In: Applied Optics, 45 (8), pp. 1866-1875, 2005.

Links | BibTeX

89.

B. T. Cox, P. C. Beard

Fast calculation of pulsed photoacoustic fields in fluids using k-space methods Journal Article

In: J. Acoust. Soc. Am., 117 (6), pp. 3616–3627, 2005.

Links | BibTeX

Conference Publications

1.

M. Roberts, E. Martin, M. D. Brown, B. T. Cox, B. E. Treeby

Matching Layer Deposition for an Open-Source Ultrasound Tomography System: Inter-Element Variation in Frequency Response Conference

2022 IEEE International Ultrasonics Symposium (IUS), 2022.

Links | BibTeX

2.

A. Stanziola, S. R. Arridge, B. T. Cox, B. E. Treeby

A research framework for writing differentiable PDE discretizations in JAX Conference

35th Conference on Neural Information Processing Systems (NeurIPS 2021), 2021.

Links | BibTeX

3.

M. Roberts, E. Martin, M. D. Brown, B. T. Cox, B. E. Treeby

Transducer Module Development for an Open-Source Ultrasound Tomography System Conference

2021 IEEE International Ultrasonics Symposium (IUS), 2021.

Links | BibTeX

4.

C. Bench, B. T. Cox

Quantitative photoacoustic estimates of intervascular blood oxygenation differences using linear unmixing Conference

1761 , 2021, (Anglo-French Physical Acoustics Conference AFPAC 2020).

Links | BibTeX

5.

C. Bench, B. T. Cox

Quantitative photoacoustic estimates of intervascular blood oxygenation differences using linear unmixing Conference

Anglo-French Physical Acoustics Conference (AFPAC) 2020, 2021.

Links | BibTeX

6.

M. Bakaric, B. Zeqiri, B. T. Cox, B. E. Treeby

Test materials for characterising heating from HIFU devices using photoacoustic thermometry Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing 2020, 11240 , 2020.

Links | BibTeX

7.

M. Roberts, E. Martin, B. T. Cox, B. E. Treeby

Progress towards an open-source, low-cost ultrasound computed tomography research system Conference

The 2nd International Workshop on Medical Ultrasound Tomography (MUST 2019), KIT Press, 2019.

Links | BibTeX

8.

M. Bakaric, A. Ivory, B. Zeqiri, B. T. Cox, B. E. Treeby

Measurement of the temperature-dependent speed of sound and change in Gruneisen parameter of tissue-mimicking materials Conference

IEEE International Ultrasonics Symposium, 2019.

Links | BibTeX

9.

D. R. Ramasawmy, B. T. Cox, B. E. Treeby

The influence of strain-optic coefficients on the transduction mechanism of planar glass etalon Fabry-Perot ultrasound sensors Conference

IEEE International Ultrasonics Symposium, 2019.

Links | BibTeX

10.

B. T. Cox, B. E. Treeby

Accurate time-varying sources in k-space pseudospectral time domain acoustic simulations Conference

IEEE International Ultrasonics Symposium, 2018.

Links | BibTeX

11.

M. D. Brown, B. T. Cox, B. E. Treeby

Investigating the effect of thickness and frequency spacing on multi-frequency acoustic kinoforms Conference

IEEE International Ultrasonics Symposium, 2017.

Links | BibTeX

12.

S. Rajagopal, T. Sainsbury, B. E. Treeby, B. T. Cox

Laser generated ultrasound sources using polymer nanocomposites for high frequency metrology Conference

IEEE International Ultrasonics Symposium, 2017.

Links | BibTeX

13.

E. S. Wise, J. L. Robertson, B. T. Cox, B. E. Treeby

Staircase-free acoustic sources for grid-based models of wave propagation Conference

IEEE International Ultrasonics Symposium, 2017.

Links | BibTeX

14.

D. R. Ramasawmy, E. Martin, J. A. Guggenheim, B. T. Cox, B. E. Treeby

Directivity of a planar hard-dielectric Fabry-Perot optical ultrasound sensor Conference

IEEE International Ultrasonics Symposium, 2017.

Links | BibTeX

15.

M. D. Brown, E. Martin, B. T. Cox, B. E. Treeby

Single pulse illumination of multi-layer photoacoustic holograms for patterned ultrasound field generation Conference

IEEE International Ultrasonics Symposium, 2016.

Links | BibTeX

16.

M. Perez Liva, J. L. Herraiz, J. M Udias, B. T. Cox, B. E. Treeby

Full-wave attenuation reconstruction in the time domain for ultrasound computed tomography Conference

IEEE 13th International Symposium on Biomedical Imaging (ISBI), 2016.

Links | BibTeX

17.

B. E. Treeby, J. Jaros, B. T. Cox

Advanced photoacoustic image reconstruction using the k-Wave toolbox Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 9708 , 2016.

Links | BibTeX

18.

E. S. Wise, B. T. Cox, B. E. Treeby

A monitor function for spectral moving mesh methods applied to nonlinear acoustics Conference

International Symposium on Nonlinear Acoustics (AIP Conference Proceedings), 1685 , 2015.

Links | BibTeX

19.

M. D. Brown, T. J. Allen, B. T. Cox, B. E. Treeby

Control of optically generated ultrasound fields using binary amplitude holograms Conference

IEEE International Ultrasonics Symposium, 2014.

Links | BibTeX

20.

J. L. Robertson, B. T. Cox, B. E. Treeby

Quantifying numerical errors in the simulation of transcranial ultrasound using pseudospectral methods Conference

IEEE International Ultrasonics Symposium, 2014.

Links | BibTeX

21.

B. E. Treeby, J. Jaros, D. Rohrbach, B. T. Cox

Modelling elastic wave propagation using the k-Wave MATLAB toolbox Conference

IEEE International Ultrasonics Symposium, 2014.

Links | BibTeX

22.

B. E. Treeby, B. T. Cox

A computationally efficient elastic wave model for media with power-law absorption Conference

IEEE International Ultrasonics Symposium, 2013.

Links | BibTeX

23.

B. E. Treeby, M. Tumen, B. T. Cox

Time domain simulation of harmonic ultrasound images and beam patterns in 3D using the k-space pseudospectral method Conference

14th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Part I, LNCS, 6891 , 2011.

Links | BibTeX

24.

J. Laufer, P. Johnson, E. Z. Zhang, B. E. Treeby, B. T. Cox, R. B. Pedley, P. C. Beard

In vivo longitudinal photoacoustic imaging of subcutaneous tumours in mice Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7899 , 2011.

Links | BibTeX

25.

B. E. Treeby, J. Laufer, E. Z. Zhang, F. C. Norris, M. F. Lythgoe, P. C. Beard, B. T. Cox

Acoustic attenuation compensation in photoacoustic tomography: Application to high resolution 3D imaging of vascular networks in mice Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7899 , 2011.

Links | BibTeX

26.

B. T. Cox, B. E. Treeby

Effect of sensor directionality on photoacoustic imaging: a study using the k-Wave toolbox Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7564 , 2010.

Links | BibTeX

27.

B. E. Treeby, B. T. Cox

Fast, tissue-realistic models of photoacoustic wave propagation for homogeneous attenuating media Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7177 , 2009.

Links | BibTeX

28.

B. T. Cox, J. Laufer, K. P. Kostli, P. C. Beard

Experimental validation of photoacoustic k-space propagation models Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 5320 , 2004.

Links | BibTeX

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