Bradley Treeby

Bradley Treeby

Position: Associate Professor
Email: b.treeby@ucl.ac.uk
Phone: +44 (0) 20 3108 4308
Extension: 54308
Room: Malet Place Engineering Building, 3.06
Address: Department of Medical Physics and Biomedical Engineering
University College London
Malet Place Engineering Building
Gower Street, London, WC1E 6BT

About

Short Bio

I am an Associate Professor in the Department of Medical Physics and Biomedical Engineering at University College London (UCL). My research sits at the interface between physical acoustics, biomedical ultrasound, numerical methods, and high-performance computing. In particular, I am interested in developing fast and accurate models of how ultrasound waves travel through the human body. This involves studying many interesting acoustic phenomena from a physical perspective, and then devising novel ways in which these can be captured by a numerical model. Much of my work has been released as an open-source acoustics toolbox for MATLAB called k-Wave.

My current EPSRC-funded research projects are related to therapeutic applications of ultrasound in the brain. The goals of this work are to: (1) develop a novel hardware platform for targeted ultrasonic neuromodulation in the deep brain, (2) to develop fast predictive models that can be used for treatment planning based on deep learning, and (3) to develop a regulatory compliant clinical user interface for the software. I work with a multidisciplinary team, and actively collaborate with researchers from a range of backgrounds, including mathematics, physics, computer science, radiology, haematology, oncology, and neurology. I teach the acoustics of ultrasound as part of the Department’s undergraduate and masters courses, and I am the admissions tutor for the Department’s Biomedical Engineering degrees.

Book Chapters

1.

M. D. Verweij, B. E. Treeby, K. W. A. van Dongen, L. Demi

Simulation of Ultrasound Fields Book Chapter

In: Panetta, D; Demi, M (Ed.): Comprehensive Biomedical Physics, 2 , Chapter 19, pp. 465–500, Elsevier, Amsterdam, 2014.

Links | BibTeX

Journal Publications

1.

M. D. Brown, B. T. Cox, B. E. Treeby

Stackable acoustic holograms Journal Article

In: Appl. Phys. Lett., 116 , pp. 261901, 2020.

Links | BibTeX

2.

M. Bakaric, P. Miloro, B. Zeqiri, B. T. Cox, B. E. Treeby

The effect of curing temperature and time on the acoustic and optical properties of PVCP Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 67 (3), pp. 505-512, 2020.

Links | BibTeX

3.

D. R. Ramasawmy, B. T. Cox, B. E. Treeby

ElasticMatrix: A MATLAB toolbox for anisotropic elastic wave propagation in layered media Journal Article

In: SoftwareX, 11 , pp. 100397, 2020.

Links | BibTeX

4.

E. Martin, J. Jaros, B. E. Treeby

Experimental validation of k-Wave: Nonlinear wave propagation in layered, absorbing fluid media Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 67 (1), pp. 81-91, 2020.

Links | BibTeX

5.

E. S. Wise, B. T. Cox, J. Jaros, B. E. Treeby

Representing arbitrary acoustic source and sensor distributions in Fourier collocation methods Journal Article

In: J. Acoust. Soc. Am., 146 (1), pp. 278-288, 2019.

Links | BibTeX

6.

M. D. Brown, E. Z. Zhang, B. E. Treeby, P. C. Beard, B. T. Cox

Reverberant cavity photoacoustic imaging Journal Article

In: Optica, 6 (6), pp. 821-822, 2019.

Links | BibTeX

7.

B. E. Treeby, J. Jaros, E. Martin, B. T. Cox

From biology to bytes: Predicting the path of ultrasound waves through the human body Journal Article

In: Acoustics Today, 15 (2), pp. 36-44, 2019.

Links | BibTeX

8.

D. R. Ramasawmy, E. Martin, J. A. Guggenheim, E. Z. Zhang, P. C. Beard, B. E. Treeby, B. T. Cox

Analysis of the Directivity of Glass-Etalon Fabry-Perot Ultrasound Sensors Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 66 (9), pp. 1504-1513, 2019.

Links | BibTeX

9.

E. Martin, B. E. Treeby

Investigation of the repeatability and reproducibility of hydrophone measurements of medical ultrasound fields Journal Article

In: J. Acoust. Soc. Am., 145 (3), pp. 1270-1282, 2019.

Links | BibTeX

10.

V. Suomi, J. Jaros, B. E. Treeby, R. Cleveland

Full modeling of high-intensity focused ultrasound and thermal heating in the kidney using realistic patient models Journal Article

In: IEEE Trans. Biomed. Eng., 65 (11), pp. 2660-2670, 2018.

Links | BibTeX

11.

V. Suomi, B. E. Treeby, J. Jaros, P. Makela, M. Anttinen, J. Saunavaara, T. Sainio, A. Kiviniemi, R. Blanco

Transurethral ultrasound therapy of the prostate in the presence of calcifications: A simulation study Journal Article

In: Med. Phys., 45 (11), pp. 4793-4805, 2018.

Links | BibTeX

12.

E. S. Wise, B. T. Cox, B. E. Treeby

Bandwidth-based mesh adaptation in multiple dimensions Journal Article

In: J. Comp. Phys., 371 , pp. 651-662, 2018.

Links | BibTeX

13.

B. E. Treeby, F. Lucka, E. Martin, B. T. Cox

Equivalent-source acoustic holography for projecting measured ultrasound fields through complex media Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 65 (10), pp. 1857-1864, 2018.

Links | BibTeX

14.

B. E. Treeby, E. S. Wise, B. T. Cox

Nonstandard Fourier Pseudospectral Time Domain (PSTD) Schemes for Partial Differential Equations Journal Article

In: Commun. Comput. Phys., 24 (3), pp. 623-634, 2018.

Links | BibTeX

15.

S. Rajagopal, T. Sainsbury, B. E. Treeby, B. T. Cox

Laser generated ultrasound sources using carbon-polymer nanocomposites for high frequency metrology Journal Article

In: J. Acoust. Soc. Am., 144 (2), pp. 584-597, 2018.

Links | BibTeX

16.

J. L. Robertson, J. Urban, J. Stitzel, B. E. Treeby

The effects of image homogenisation on simulated transcranial ultrasound propagation Journal Article

In: Phys. Med. Biol., 63 , pp. 145014, 2018.

Links | BibTeX

17.

M. Bakaric, E. Martin, P. S. Georgiou, B. T. Cox, H. Payne, B. E. Treeby

Experimental study of beam distortion due to fiducial markers during salvage HIFU in the prostate Journal Article

In: Journal of Therapeutic Ultrasound, 6 (1), pp. 1-12, 2018.

Links | BibTeX

18.

B. E. Treeby, J. Budisky, E. S. Wise, J. Jaros, B. T. Cox

Rapid calculation of acoustic fields from arbitrary continuous-wave sources Journal Article

In: J. Acoust. Soc. Am., 143 (1), pp. 529-537, 2018.

Links | BibTeX

19.

M. D. Brown, B. T. Cox, B. E. Treeby

Design of multi-frequency acoustic kinoforms Journal Article

In: Appl. Phys. Lett., 111 (24), pp. 244101, 2017.

Links | BibTeX

20.

E. Martin, E. Z. Zhang, J. A. Guggenheim, P. C. Beard, B. E. Treeby

Rapid spatial mapping of focused ultrasound fields using a planar Fabry-Perot sensor Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 64 (11), pp. 1711-1722, 2017.

Links | BibTeX

21.

E. S. Wise, B. T. Cox, B. E. Treeby

Mesh density functions based on local bandwidth applied to moving mesh methods Journal Article

In: Commun. Comput. Phys., 22 (5), pp. 1286-1308, 2017.

Links | BibTeX

22.

J. L. Robertson, B. T. Cox, J. Jaros, B. E. Treeby

Accurate simulation of transcranial ultrasound propagation for ultrasonic neuromodulation and stimulation Journal Article

In: J. Acoust. Soc. Am., 141 (3), pp. 1726-1738, 2017.

Links | BibTeX

23.

M. Perez Liva, J. L. Herraiz, J. M. Udias, E. Miller, B. T. Cox, B. E. Treeby

Time domain reconstruction of sound speed and attenuation in ultrasound computed tomography using full wave inversion Journal Article

In: J. Acoust. Soc. Am., 141 (3), pp. 1595-1604, 2017.

Links | BibTeX

24.

J. L. Robertson, E. Martin, B. T. Cox, B. E. Treeby

Sensitivity of simulated transcranial ultrasound fields to acoustic medium property maps Journal Article

In: Phys. Med. Biol., 62 (7), pp. 2559-2580, 2017.

Links | BibTeX

25.

M. D. Brown, D. I. Nikitichev, B. E. Treeby, B. T. Cox

Generating arbitrary ultrasound fields with tailored optoacoustic surface profiles Journal Article

In: Appl. Phys. Lett., 110 (9), pp. 094102, 2017.

Links | BibTeX

26.

P. S. Georgiou, J. Jaros, H. Payne, C. Allen, T. T. Shah, H. U. Ahmed, E. Gibson, D. Barratt, B. E. Treeby

Beam distortion due to gold fiducial markers during salvage high-intensity focused ultrasound in the prostate Journal Article

In: Med. Phys., 44 (2), pp. 679–693, 2017.

Links | BibTeX

27.

J. Jaros, F. Vaverka, B. E. Treeby

Spectral domain decomposition using local Fourier basis: Application to ultrasound simulation on a cluster of GPUs Journal Article

In: Supercomputing Frontiers and Innovations, 3 (3), pp. 39–54, 2016.

Links | BibTeX

28.

S. R. Arridge, M. M. Betcke, B. T. Cox, F. Lucka, B. E. Treeby

On the adjoint operator in photoacoustic tomography Journal Article

In: Inv. Problems, 32 (11), pp. 115012, 2016.

Links | BibTeX

29.

E. Martin, Y. T. Ling, B. E. Treeby

Simulating focused ultrasound transducers using discrete sources on regular cartesian grids Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 63 (10), pp. 1535–1542, 2016.

Links | BibTeX

30.

J. Jaros, A. P. Rendell, B. E. Treeby

Full-wave nonlinear ultrasound simulation on distributed clusters with applications in high-intensity focused ultrasound Journal Article

In: Int. J. High Perform. Comput., 30 (2), pp. 137–155, 2016.

Links | BibTeX

31.

M. D. Brown, J. Jaros, B. T. Cox, B. E. Treeby

Control of broadband optically generated ultrasound pulses using binary amplitude holograms Journal Article

In: J. Acoust. Soc. Am., 139 (4), pp. 1637–1467, 2016.

Links | BibTeX

32.

A. P. Jathoul, J. Laufer, O. Ogunlade, B. E. Treeby, B. T. Cox, E. Z. Zhang, P. Johnson, A. R. Pizzey, B. Philip, T. Marafioti, M. F. Lythgoe, R. B. Pedley, M. A. Pule, P. C. Beard

Deep in vivo photoacoustic imaging of mammalian tissues using a tyrosinase-based genetic reporter Journal Article

In: Nature Photonics, 9 , pp. 239–-246, 2015.

Links | BibTeX

33.

B. E. Treeby, B. T. Cox

Modeling power law absorption and dispersion in viscoelastic solids using a split-field and the fractional Laplacian Journal Article

In: J. Acoust. Soc. Am., 136 (4), pp. 1499-1510, 2014.

Links | BibTeX

34.

R. J. Colchester, C. A. Mosse, D. S. Bhachu, J. C. Bear, C. J. Carmalt, I. P. Parkin, B. E. Treeby, I. Papakonstantinou, A. E. Desjardins

Laser-generated ultrasound with optical fibres using functionalised carbon nanotube composite coatings Journal Article

In: Appl. Phys. Let., 104 , pp. 173502, 2014.

Links | BibTeX

35.

B. E. Treeby

Modeling nonlinear wave propagation on nonuniform grids using a mapped k-space pseudospectral method Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 60 (10), pp. 2208–2213, 2013.

Links | BibTeX

36.

B. E. Treeby

Acoustic attenuation compensation in photoacoustic tomography using time-variant filtering Journal Article

In: J. Biomed. Opt., 18 (3), pp. 036008, 2013.

Links | BibTeX

37.

K. Firouzi, B. T. Cox, B. E. Treeby, N. Saffari

A first-order k-space model for elastic wave propagation in heterogeneous media Journal Article

In: J. Acoust. Soc. Am., 132 (3), pp. 1271–1283, 2012.

Links | BibTeX

38.

J. Laufer, P. Johnson, E. Z. Zhang, B. E. Treeby, B. T. Cox, R. B. Pedley, P. C. Beard

In vivo preclinical photoacoustic imaging of tumour vasculature development and therapy Journal Article

In: J. Biomed. Opt., 17 (5), pp. 056016, 2012.

Links | BibTeX

39.

J. Laufer, F. C. Norris, J. Cleary, E. Z. Zhang, B. E. Treeby, B. T. Cox, P. Johnson, P. Scambler, M. F. Lythgoe, P. C. Beard

In vivo photoacoustic imaging of mouse embryos Journal Article

In: J. Biomed. Opt., 17 (6), pp. 061220, 2012.

Links | BibTeX

40.

D. Modgil, B. E. Treeby, P. J. La Riviere

Photoacoustic image reconstruction in an attenuating medium using singular-value decomposition Journal Article

In: J. Biomed. Opt., 17 (6), pp. 061204, 2012.

Links | BibTeX

41.

B. E. Treeby, J. Jaros, A. P. Rendell, B. T. Cox

Modeling nonlinear ultrasound propagation in heterogeneous media with power law absorption using a k-space pseudospectral method Journal Article

In: J. Acoust. Soc. Am., 131 (6), pp. 4324–4336, 2012.

Links | BibTeX

42.

B. E. Treeby, T. K. Varslot, E. Z. Zhang, J. Laufer, P. C. Beard

Automatic sound speed selection in photoacoustic image reconstruction using an autofocus approach Journal Article

In: J. Biomed. Opt., 16 (9), pp. 090501, 2011.

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43.

E. Z. Zhang, B. Povazay, J. Laufer, A. Alex, B. Hofer, R. B. Pedley, C. Glittenberg, B. E. Treeby, B. T. Cox, P. C. Beard, W. Drexler

Multimodal photoacoustic and optical coherence tomography scanner using an all optical detection scheme for 3D morphological skin imaging Journal Article

In: Biomed. Opt. Express, 2 (8), pp. 2202–2215, 2011.

Links | BibTeX

44.

B. E. Treeby, B. T. Cox

A k-space Green's function solution for acoustic initial value problems in homogeneous media with power law absorption Journal Article

In: J. Acoust. Soc. Am., 129 (6), pp. 3652–3660, 2011.

Links | BibTeX

45.

B. E. Treeby, E. Z. Zhang, A. S. Thomas, B. T. Cox

Measurement of the ultrasound attenuation and dispersion in whole human blood and its components from 0-70 MHz Journal Article

In: Ultrasound Med. Biol., 37 (2), pp. 289–300, 2011.

Links | BibTeX

46.

B. E. Treeby, B. T. Cox

k-Wave: MATLAB toolbox for the simulation and reconstruction of photoacoustic wave-fields Journal Article

In: J. Biomed. Opt., 15 (2), pp. 021314, 2010.

Links | BibTeX

47.

B. T. Cox, B. E. Treeby

Artifact trapping during time reversal photoacoustic imaging for acoustically heterogeneous media Journal Article

In: IEEE Trans. Med. Imaging, 29 (2), pp. 387–396, 2010.

Links | BibTeX

48.

B. E. Treeby, B. T. Cox

Modeling power law absorption and dispersion for acoustic propagation using the fractional Laplacian Journal Article

In: J. Acoust. Soc. Am., 127 (5), pp. 2741–2748, 2010.

Links | BibTeX

49.

B. E. Treeby, E. Z. Zhang, B. T. Cox

Photoacoustic tomography in absorbing acoustic media using time reversal Journal Article

In: Inverse Probl., 26 (11), pp. 115003, 2010.

Links | BibTeX

50.

B. E. Treeby, B. T. Cox, E. Z. Zhang, S. K. Patch, P. C. Beard

Measurement of broadband temperature-dependent ultrasonic attenuation and dispersion using photoacoustics Journal Article

In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 56 (8), pp. 1666–1676, 2009.

Links | BibTeX

51.

B. E. Treeby, J. Pan

A practical examination of the errors arising in the direct collocation boundary element method for acoustic scattering Journal Article

In: Eng. Anal. Bound. Elem., 33 (11), pp. 1302–1315, 2009.

Links | BibTeX

52.

B. E. Treeby, J. Pan, R. M. Paurobally

The effect of hair on auditory localization cues Journal Article

In: J. Acoust. Soc. Am., 122 (6), pp. 3586–3597, 2007.

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53.

B. E. Treeby, J. Pan, R. M. Paurobally

An experimental study of the acoustic impedance characteristics of human hair Journal Article

In: J. Acoust. Soc. Am., 122 (4), pp. 2107–2117, 2007.

Links | BibTeX

54.

B. E. Treeby, J. Pan, R. M. Paurobally

Acoustic scattering by a sphere with a hemispherically split boundary condition Journal Article

In: J. Acoust. Soc. Am., 122 (1), pp. 46-57, 2007.

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55.

B. E. Treeby, R. M. Paurobally, J. Pan

The effect of impedance on interaural azimuth cues derived from a spherical head model Journal Article

In: J. Acoust. Soc. Am., 121 (4), pp. 2217–2226, 2007.

Links | BibTeX

Conference Publications

1.

M. Jaros, B. E. Treeby, P. S. Georgiou, J. Jaros

k-Dispatch: A workflow management system for the automated execution of biomedical ultrasound simulations on remote computing resources Conference

PASC '20: Proceedings of the Platform for Advanced Scientific Computing Conference, ACM, New York, NY, USA, 2020.

Links | BibTeX

2.

M. Bakaric, B. Zeqiri, B. T. Cox, B. E. Treeby

Test materials for characterising heating from HIFU devices using photoacoustic thermometry Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing 2020, 11240 , 2020.

Links | BibTeX

3.

M. Roberts, E. Martin, B. T. Cox, B. E. Treeby

Progress towards an open-source, low-cost ultrasound computed tomography research system Conference

The 2nd International Workshop on Medical Ultrasound Tomography (MUST 2019), KIT Press, 2019.

Links | BibTeX

4.

L. Albelda Gimeno, E. Martin, O. Wright, B. E. Treeby

Experimental assessment of skull aberration and transmission loss at 270 kHz for focused ultrasound stimulation of the primary visual cortex Conference

IEEE International Ultrasonics Symposium, 2019.

Links | BibTeX

5.

M. Bakaric, A. Ivory, B. Zeqiri, B. T. Cox, B. E. Treeby

Measurement of the temperature-dependent speed of sound and change in Gruneisen parameter of tissue-mimicking materials Conference

IEEE International Ultrasonics Symposium, 2019.

Links | BibTeX

6.

D. R. Ramasawmy, B. T. Cox, B. E. Treeby

The influence of strain-optic coefficients on the transduction mechanism of planar glass etalon Fabry-Perot ultrasound sensors Conference

IEEE International Ultrasonics Symposium, 2019.

Links | BibTeX

7.

F. Vaverka, B. E. Treeby, J. Jaros

Evaluation of the suitability of Intel Xeon Phi clusters for the simulation of ultrasound wave propagation using pseudospectral methods Conference

International Conference on Computational Science (ICCS 2019), LNCS, , 11538 , 2019.

Links | BibTeX

8.

B. T. Cox, B. E. Treeby

Accurate time-varying sources in k-space pseudospectral time domain acoustic simulations Conference

IEEE International Ultrasonics Symposium, 2018.

Links | BibTeX

9.

B. E. Treeby, F. Vaverka, J. Jaros

Performance and accuracy analysis of nonlinear k-Wave simulations using local domain decomposition with an 8-GPU server Conference

Proc. Mtgs. Acoust., 34 , 2018.

Links | BibTeX

10.

V. Suomi, B. E. Treeby, J. Jaros, J. Saunavaara, A. Kiviniemi, R. Blanco

The effect of tissue physiological variability on transurethral ultrasound therapy of the prostate Conference

40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2018.

Links | BibTeX

11.

K. Kadlubiak, J. Jaros, B. E. Treeby

GPU-Accelerated Simulation of Elastic Wave Propagation Conference

2018 International Conference on High Performance Computing & Simulation (HPCS), IEEE, 2018.

Links | BibTeX

12.

M. Cudova, B. E. Treeby, J. Jaros

Design of HIFU treatment plans using an evolutionary strategy Conference

Proceedings of the Genetic and Evolutionary Computation Conference (GECCO) Companion, 2018.

Links | BibTeX

13.

M. D. Brown, B. T. Cox, B. E. Treeby

Investigating the effect of thickness and frequency spacing on multi-frequency acoustic kinoforms Conference

IEEE International Ultrasonics Symposium, 2017.

Links | BibTeX

14.

S. Rajagopal, T. Sainsbury, B. E. Treeby, B. T. Cox

Laser generated ultrasound sources using polymer nanocomposites for high frequency metrology Conference

IEEE International Ultrasonics Symposium, 2017.

Links | BibTeX

15.

E. S. Wise, J. L. Robertson, B. T. Cox, B. E. Treeby

Staircase-free acoustic sources for grid-based models of wave propagation Conference

IEEE International Ultrasonics Symposium, 2017.

Links | BibTeX

16.

D. R. Ramasawmy, E. Martin, J. A. Guggenheim, B. T. Cox, B. E. Treeby

Directivity of a planar hard-dielectric Fabry-Perot optical ultrasound sensor Conference

IEEE International Ultrasonics Symposium, 2017.

Links | BibTeX

17.

M. D. Brown, E. Martin, B. T. Cox, B. E. Treeby

Single pulse illumination of multi-layer photoacoustic holograms for patterned ultrasound field generation Conference

IEEE International Ultrasonics Symposium, 2016.

Links | BibTeX

18.

V. Suomi, J. Jaros, B. E. Treeby, R. Cleveland

Nonlinear 3-D simulation of high-intensity focused ultrasound therapy in the kidney Conference

IEEE 38th Annual International Conference of the Engineering in Medicine and Biology Society (EMBC), 2016.

Links | BibTeX

19.

M. Perez Liva, J. L. Herraiz, J. M Udias, B. T. Cox, B. E. Treeby

Full-wave attenuation reconstruction in the time domain for ultrasound computed tomography Conference

IEEE 13th International Symposium on Biomedical Imaging (ISBI), 2016.

Links | BibTeX

20.

B. E. Treeby, J. Jaros, B. T. Cox

Advanced photoacoustic image reconstruction using the k-Wave toolbox Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 9708 , 2016.

Links | BibTeX

21.

M. Perez Liva, J. L. Herraiz, L. Medina Valdes, J. Camacho, C. Fritsch, B. E. Treeby, J. M Udias

Regularization of image reconstruction in ultrasound computed tomography Conference

IEEE Nuclear Science Symposium and Medical Imaging Conference, 2015.

Links | BibTeX

22.

Y. T. Ling, E. Martin, B. E. Treeby

Discrete source model for simulating bowl-shaped focused ultrasound transducers on regular grids: Design and experimental validation Conference

IEEE International Ultrasonics Symposium, 2015.

Links | BibTeX

23.

E. Martin, E. Z. Zhang, P. C. Beard, B. E. Treeby

Rapid spatial mapping of the acoustic pressure in high intensity focused ultrasound fields at clinical intensities using a novel planar Fabry-Perot interferometer Conference

IEEE International Ultrasonics Symposium, 2015.

Links | BibTeX

24.

B. E. Treeby, T. Saratoon

The contribution of shear wave absorption to ultrasound heating in bones: Coupled elastic and thermal modeling Conference

IEEE International Ultrasonics Symposium, 2015.

Links | BibTeX

25.

E. S. Wise, B. T. Cox, B. E. Treeby

A monitor function for spectral moving mesh methods applied to nonlinear acoustics Conference

International Symposium on Nonlinear Acoustics (AIP Conference Proceedings), 1685 , 2015.

Links | BibTeX

26.

E. Martin, B. E. Treeby

Experimental validation of computational models for large-scale nonlinear ultrasound simulations in heterogeneous, absorbing fluid media Conference

International Symposium on Nonlinear Acoustics (AIP Conference Proceedings), 1685 , 2015.

Links | BibTeX

27.

J. Jaros, V. Nikl, B. E. Treeby

Large-scale ultrasound simulations using the hybrid OpenMP/MPI decomposition Conference

Proceedings of the 3rd International Conference on Exascale Applications and Software, 2015, ISBN: 978-0-9926615-1-9.

Links | BibTeX

28.

M. D. Brown, T. J. Allen, B. T. Cox, B. E. Treeby

Control of optically generated ultrasound fields using binary amplitude holograms Conference

IEEE International Ultrasonics Symposium, 2014.

Links | BibTeX

29.

J. L. Robertson, B. T. Cox, B. E. Treeby

Quantifying numerical errors in the simulation of transcranial ultrasound using pseudospectral methods Conference

IEEE International Ultrasonics Symposium, 2014.

Links | BibTeX

30.

L. Demi, B. E. Treeby, M. D. Verweij

Comparison between two different full-wave methods for the computation of nonlinear ultrasound fields in inhomogeneous and attenuating tissue Conference

IEEE International Ultrasonics Symposium, 2014.

Links | BibTeX

31.

B. E. Treeby, J. Jaros, D. Rohrbach, B. T. Cox

Modelling elastic wave propagation using the k-Wave MATLAB toolbox Conference

IEEE International Ultrasonics Symposium, 2014.

Links | BibTeX

32.

E. S. Wise, B. E. Treeby

Full-wave nonlinear ultrasound simulation in an axisymmetric coordinate system using the discrete sine and cosine transforms Conference

IEEE International Ultrasonics Symposium, 2013.

Links | BibTeX

33.

B. E. Treeby, B. T. Cox

A computationally efficient elastic wave model for media with power-law absorption Conference

IEEE International Ultrasonics Symposium, 2013.

Links | BibTeX

34.

T. Oruganti, J. Laufer, B. E. Treeby

Vessel filtering of photoacoustic images Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 8581 , 2013.

Links | BibTeX

35.

N. Nandapalan, J. Jaros, A. P. Rendell, B. E. Treeby

Implementation of 3D FFTs across multiple GPUs in shared memory environments Conference

13th International Conference on Parallel and Distributed Computing, Applications and Technologies (PDCAT), 2012.

Links | BibTeX

36.

K. Wang, E. Teoh, J. Jaros, B. E. Treeby

Modelling nonlinear ultrasound propagation in absorbing media using the k-Wave toolbox: Experimental validation Conference

IEEE International Ultrasonics Symposium, 2012.

Links | BibTeX

37.

A. Haigh, B. E. Treeby, E. McCreath

Ultrasound simulation on the cell broadband engine using the Westervelt equation Conference

12th International Conference on Algorithms and Architectures for Parallel Processing, Part 1, LNCS, 7439 , 2012.

Links | BibTeX

38.

J. Jaros, B. E. Treeby, A. P. Rendell

Use of multiple GPUs on shared memory multiprocessors for ultrasound propagation simulations Conference

10th Australasian Symposium on Parallel and Distributed Computing, 127 , 2012, ISBN: 978-1-921770-08-1.

Links | BibTeX

39.

B. E. Treeby, M. Tumen, B. T. Cox

Time domain simulation of harmonic ultrasound images and beam patterns in 3D using the k-space pseudospectral method Conference

14th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Part I, LNCS, 6891 , 2011.

Links | BibTeX

40.

J. Laufer, P. Johnson, E. Z. Zhang, B. E. Treeby, B. T. Cox, R. B. Pedley, P. C. Beard

In vivo longitudinal photoacoustic imaging of subcutaneous tumours in mice Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7899 , 2011.

Links | BibTeX

41.

B. E. Treeby, J. Laufer, E. Z. Zhang, F. C. Norris, M. F. Lythgoe, P. C. Beard, B. T. Cox

Acoustic attenuation compensation in photoacoustic tomography: Application to high resolution 3D imaging of vascular networks in mice Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7899 , 2011.

Links | BibTeX

42.

B. T. Cox, B. E. Treeby

Effect of sensor directionality on photoacoustic imaging: a study using the k-Wave toolbox Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7564 , 2010.

Links | BibTeX

43.

B. E. Treeby, B. T. Cox

Fast, tissue-realistic models of photoacoustic wave propagation for homogeneous attenuating media Conference

Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7177 , 2009.

Links | BibTeX

44.

B. E. Treeby, R. M. Paurobally, J. Pan

Decomposition of the HRTF from a sphere with neck and hair Conference

Proceedings of the 13th International Conference on Auditory Display, 2007.

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45.

B. E. Treeby, R. M. Paurobally, J. Pan

Investigation of the effect of impedance on azimuth cues derived from spherical head models Conference

Proceedings of the 12th International Conference on Auditory Display, 2006, ISBN: 0-902-23820-5.

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