Bradley Treeby

Position:	Professor of Biomedical Ultrasound
Email:	b.treeby@ucl.ac.uk
Phone:	+44 (0) 20 3108 4308
Extension:	54308
Room:	Malet Place Engineering Building, 3.06
Address:	Department of Medical Physics and Biomedical Engineering University College London Malet Place Engineering Building Gower Street, London, WC1E 6BT

About

Short Bio

I am a Professor of Biomedical Ultrasound in the Department of Medical Physics and Biomedical Engineering at University College London (UCL). My research sits at the interface between physical acoustics, biomedical ultrasound, numerical methods, and high-performance computing. In particular, I am interested in developing fast and accurate models of how ultrasound waves travel through the human body. This involves studying many interesting acoustic phenomena from a physical perspective, and then devising novel ways in which these can be captured by a numerical model. Much of my work has been released as an open-source acoustics toolbox for MATLAB called k-Wave.

My current EPSRC-funded research projects are related to therapeutic applications of ultrasound in the brain. The goals of this work are to: (1) develop a novel hardware platform for targeted ultrasonic neuromodulation in the deep brain, (2) to develop fast predictive models that can be used for treatment planning based on deep learning, and (3) to develop a regulatory compliant clinical user interface for the software. I work with a multidisciplinary team, and actively collaborate with researchers from a range of backgrounds, including mathematics, physics, computer science, radiology, haematology, oncology, and neurology. I teach the acoustics of ultrasound as part of the Department’s undergraduate and masters courses, and I am the admissions tutor for the Department’s Biomedical Engineering degrees.

Book Chapters

A. Thielscher, K. H. Madsen, G. E. Strangman, B. E. Treeby

Computational methods for dosimetry Book Chapter

In: Wassermann, E M; Peterchev, A V; Ziemann, U; Lisanby, S H; Siebner, H R; Walsh, V (Ed.): The Oxford Handbook of Transcranial Stimulation, Second Edition, 2021.

Links | BibTeX

M. D. Verweij, B. E. Treeby, K. W. A. van Dongen, L. Demi

Simulation of Ultrasound Fields Book Chapter

In: Panetta, D; Demi, M (Ed.): Comprehensive Biomedical Physics, 2 , Chapter 19, pp. 465–500, Elsevier, Amsterdam, 2014.

Links | BibTeX

Journal Publications

1.	S. Hosseini, O. Puonti, B. E. Treeby, L. G. Hanson, A. Thielscher A head template for computational dose modelling for transcranial focused ultrasound stimulation Journal Article In: NeuroImage, 277 , pp. 120227, 2023. Links \| BibTeX @article{2023-Hosseini-NEUROIMAGE, title = {A head template for computational dose modelling for transcranial focused ultrasound stimulation}, author = {S. Hosseini and O. Puonti and B. E. Treeby and L. G. Hanson and A. Thielscher}, url = {http://bug.medphys.ucl.ac.uk/papers/2023-Hosseini-NEUROIMAGE.pdf}, doi = {10.1016/j.neuroimage.2023.120227}, year = {2023}, date = {2023-08-15}, journal = {NeuroImage}, volume = {277}, pages = {120227}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2023-Hosseini-NEUROIMAGE.pdf doi:10.1016/j.neuroimage.2023.120227 Close
2.	M. Bakaric, O. Ogunlade, P. Miloro, B. Zeqiri, B. T. Cox, B. E. Treeby Characterisation of hydrophone sensitivity with temperature using a broadband laser-generated ultrasound source Journal Article In: Metrologia, 60 (5), pp. 055002, 2023. Links \| BibTeX @article{2023-Bakaric-Metrologia, title = {Characterisation of hydrophone sensitivity with temperature using a broadband laser-generated ultrasound source}, author = {M. Bakaric and O. Ogunlade and P. Miloro and B. Zeqiri and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2023-Bakaric-Metrologia.pdf}, doi = {10.1088/1681-7575/ace3c3}, year = {2023}, date = {2023-07-28}, journal = {Metrologia}, volume = {60}, number = {5}, pages = {055002}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2023-Bakaric-Metrologia.pdf doi:10.1088/1681-7575/ace3c3 Close
3.	M. Roberts, E. Martin, M. D. Brown, B. T. Cox, B. E. Treeby open-UST: An Open-Source Ultrasound Tomography Transducer Array System Journal Article In: IEEE Transactions of Ultrasonics, Ferroelectrics, and Frequency Control, 70 (7), pp. 782-791, 2023. Links \| BibTeX @article{2023-Roberts-IEEETUFFC, title = {open-UST: An Open-Source Ultrasound Tomography Transducer Array System}, author = {M. Roberts and E. Martin and M. D. Brown and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2023-Roberts-IEEETUFFC.pdf}, doi = {10.1109/TUFFC.2023.3280635}, year = {2023}, date = {2023-05-31}, journal = {IEEE Transactions of Ultrasonics, Ferroelectrics, and Frequency Control}, volume = {70}, number = {7}, pages = {782-791}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2023-Roberts-IEEETUFFC.pdf doi:10.1109/TUFFC.2023.3280635 Close
4.	A. Stanziola, J. A. Pineda-Pardo, B. E. Treeby Transcranial ultrasound simulation with uncertainty estimation Journal Article In: JASA Express Letters, 3 (5), pp. 052001, 2023. Links \| BibTeX @article{2023-Stanziola-JASAEL-Uncertainty, title = {Transcranial ultrasound simulation with uncertainty estimation}, author = {A. Stanziola and J. A. Pineda-Pardo and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2023-Stanziola-JASAEL-2}, doi = {10.1121/10.0019380}, year = {2023}, date = {2023-05-11}, journal = {JASA Express Letters}, volume = {3}, number = {5}, pages = {052001}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2023-Stanziola-JASAEL-2 doi:10.1121/10.0019380 Close
5.	A. Stanziola, S. R. Arridge, B. T. Cox, B. E. Treeby A learned Born series for highly-scattering media Journal Article In: JASA Express Letters, 3 (5), pp. 052401, 2023. Links \| BibTeX @article{2023-Stanziola-JASAEL, title = {A learned Born series for highly-scattering media}, author = {A. Stanziola and S. R. Arridge and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2023-Stanziola-JASAEL.pdf}, doi = {10.1121/10.0017937}, year = {2023}, date = {2023-05-01}, journal = {JASA Express Letters}, volume = {3}, number = {5}, pages = {052401}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2023-Stanziola-JASAEL.pdf doi:10.1121/10.0017937 Close
6.	M. D. Brown, B. T. Cox, B. E. Treeby Binary volume acoustic holograms Journal Article In: Physical Review Applied, 19 , pp. 044032, 2023. Abstract \| Links \| BibTeX @article{2023-Brown-PRA.pdf, title = {Binary volume acoustic holograms}, author = {M. D. Brown and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2023-Brown-PRA.pdf}, doi = {10.1103/PhysRevApplied.19.044032}, year = {2023}, date = {2023-04-11}, journal = {Physical Review Applied}, volume = {19}, pages = {044032}, abstract = {In recent years, high-resolution additive manufacturing has enabled a diverse range of low-cost methods for ultrasonic wave-front shaping. Acoustic holograms, in particular, allow for the generation of arbitrary diffraction-limited acoustic fields at megahertz frequencies from single-element transducers. These are phase plates that function as direct acoustic analogs to thin optical holograms. In this work, it is shown that, by using multiple polymer three-dimensional (3D) printing, two-material (binary) acoustic analogs to “thick” or volume optical holograms can also be generated. First, an analytic approach for designing a volume hologram that diffracts a set of input fields onto a desired set of output fields is briefly summarized. Next, a greedy-optimization approach based on random downhill binary search able to account for the constraints imposed by the chosen fabrication method is introduced. Finally, an experimental test case designed to diffract the field generated by a 2.54-cm planar lead zirconate titanate (PZT) transducer onto eight distinct patterns dependent on the direction of the incident field is used to validate the approach and the design method. Field scans of the eight target fields demonstrate that acoustic analogs of optical volume holograms can be generated using multipolymer printing and that these allow the multiplexing of distinct fields onto different incident field directions.}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close In recent years, high-resolution additive manufacturing has enabled a diverse range of low-cost methods for ultrasonic wave-front shaping. Acoustic holograms, in particular, allow for the generation of arbitrary diffraction-limited acoustic fields at megahertz frequencies from single-element transducers. These are phase plates that function as direct acoustic analogs to thin optical holograms. In this work, it is shown that, by using multiple polymer three-dimensional (3D) printing, two-material (binary) acoustic analogs to “thick” or volume optical holograms can also be generated. First, an analytic approach for designing a volume hologram that diffracts a set of input fields onto a desired set of output fields is briefly summarized. Next, a greedy-optimization approach based on random downhill binary search able to account for the constraints imposed by the chosen fabrication method is introduced. Finally, an experimental test case designed to diffract the field generated by a 2.54-cm planar lead zirconate titanate (PZT) transducer onto eight distinct patterns dependent on the direction of the incident field is used to validate the approach and the design method. Field scans of the eight target fields demonstrate that acoustic analogs of optical volume holograms can be generated using multipolymer printing and that these allow the multiplexing of distinct fields onto different incident field directions. Close http://bug.medphys.ucl.ac.uk/papers/2023-Brown-PRA.pdf doi:10.1103/PhysRevApplied.19.044032 Close
7.	A. Stanziola, S. R. Arridge, B. T. Cox, B. E. Treeby j-Wave: An open-source differentiable wave simulator Journal Article In: SoftwareX, 22 , pp. 101338, 2023. Abstract \| Links \| BibTeX @article{2023-Stanziola-SoftwareX, title = {j-Wave: An open-source differentiable wave simulator}, author = {A. Stanziola and S. R. Arridge and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2023-Stanziola-SoftwareX.pdf }, doi = {10.1016/j.softx.2023.101338}, year = {2023}, date = {2023-02-07}, journal = {SoftwareX}, volume = {22}, pages = {101338}, abstract = {We present an open-source differentiable acoustic simulator, j-Wave, which can solve time-varying and time-harmonic acoustic problems. It supports automatic differentiation, which is a program transformation technique that has many applications, especially in machine learning and scientific computing. j-Wave is composed of modular components that can be easily customized and reused. At the same time, it is compatible with some of the most popular machine learning libraries, such as JAX and TensorFlow. The accuracy of the simulation results for known configurations is evaluated against the widely used k-Wave toolbox and a cohort of acoustic simulation software. j-Wave is available from https://github.com/ucl-bug/jwave.}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close We present an open-source differentiable acoustic simulator, j-Wave, which can solve time-varying and time-harmonic acoustic problems. It supports automatic differentiation, which is a program transformation technique that has many applications, especially in machine learning and scientific computing. j-Wave is composed of modular components that can be easily customized and reused. At the same time, it is compatible with some of the most popular machine learning libraries, such as JAX and TensorFlow. The accuracy of the simulation results for known configurations is evaluated against the widely used k-Wave toolbox and a cohort of acoustic simulation software. j-Wave is available from https://github.com/ucl-bug/jwave. Close http://bug.medphys.ucl.ac.uk/papers/2023-Stanziola-SoftwareX.pdf doi:10.1016/j.softx.2023.101338 Close
8.	T. Nandi, A. Johnstone, E. Martin, C. Zich, R. Cooper, S. Bestmann, T. O. Bergmann, B. E. Treeby, C. J. Stagg Ramped V1 transcranial ultrasonic stimulation modulates but does not evoke visual evoked potentials Journal Article In: Brain Stimulation, 16 , pp. 553-555, 2023. Links \| BibTeX @article{2023-Nandi-BS.pdf, title = {Ramped V1 transcranial ultrasonic stimulation modulates but does not evoke visual evoked potentials}, author = {T. Nandi and A. Johnstone and E. Martin and C. Zich and R. Cooper and S. Bestmann and T. O. Bergmann and B. E. Treeby and C. J. Stagg}, url = {http://bug.medphys.ucl.ac.uk/papers/2023-Nandi-BS.pdf}, doi = {10.1016/j.brs.2023.02.004}, year = {2023}, date = {2023-01-26}, journal = {Brain Stimulation}, volume = {16}, pages = {553-555}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2023-Nandi-BS.pdf doi:10.1016/j.brs.2023.02.004 Close
9.	R. Xu, B. E. Treeby, E. Martin Experiments and simulations demonstrating the rapid ultrasonic rewarming of frozen tissue cryovials Journal Article In: J. Acoust. Soc. Am., 153 (1), pp. 517-528, 2023. Links \| BibTeX @article{2023-Xu-JASA, title = {Experiments and simulations demonstrating the rapid ultrasonic rewarming of frozen tissue cryovials}, author = {R. Xu and B. E. Treeby and E. Martin}, url = {http://bug.medphys.ucl.ac.uk/papers/2023-Xu-JASA.pdf}, doi = {10.1121/10.0016886}, year = {2023}, date = {2023-01-02}, journal = {J. Acoust. Soc. Am.}, volume = {153}, number = {1}, pages = {517-528}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2023-Xu-JASA.pdf doi:10.1121/10.0016886 Close
10.	P. Kleparnik, P. Zemcik, B. E. Treeby, J. Jaros On-the-Fly Calculation of Time-Averaged Acoustic Intensity in Time-Domain Ultrasound Simulations Using a k-Space Pseudospectral Method Journal Article In: IEEE Transactions of Ultrasonics, Ferroelectrics, and Frequency Control, 69 (10), pp. 2917-2929, 2022. Links \| BibTeX @article{2022-Kleparnik-IEEETUFFC, title = {On-the-Fly Calculation of Time-Averaged Acoustic Intensity in Time-Domain Ultrasound Simulations Using a k-Space Pseudospectral Method}, author = {P. Kleparnik and P. Zemcik and B. E. Treeby and J. Jaros}, url = {http://bug.medphys.ucl.ac.uk/papers/2022-Kleparnik-IEEETUFFC.pdf }, doi = {10.1109/TUFFC.2022.3199173}, year = {2022}, date = {2022-08-09}, journal = {IEEE Transactions of Ultrasonics, Ferroelectrics, and Frequency Control}, volume = {69}, number = {10}, pages = {2917-2929}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2022-Kleparnik-IEEETUFFC.pdf doi:10.1109/TUFFC.2022.3199173 Close
11.	M. Miscouridou, J. A. Pineda-Pardo, C. J. Stagg, B. E. Treeby, A. Stanziola Classical and Learned MR to Pseudo-CT Mappings for Accurate Transcranial Ultrasound Simulation Journal Article In: IEEE Transactions of Ultrasonics, Ferroelectrics, and Frequency Control, 69 (10), pp. 2896-2905, 2022. Links \| BibTeX @article{2022-Miscouridou-IEEETUFFC, title = {Classical and Learned MR to Pseudo-CT Mappings for Accurate Transcranial Ultrasound Simulation}, author = {M. Miscouridou and J. A. Pineda-Pardo and C. J. Stagg and B. E. Treeby and A. Stanziola}, url = {http://bug.medphys.ucl.ac.uk/papers/2022-Miscouridou-IEEETUFFC.pdf }, doi = {10.1109/TUFFC.2022.3198522}, year = {2022}, date = {2022-08-06}, journal = {IEEE Transactions of Ultrasonics, Ferroelectrics, and Frequency Control}, volume = {69}, number = {10}, pages = {2896-2905}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2022-Miscouridou-IEEETUFFC.pdf doi:10.1109/TUFFC.2022.3198522 Close
12.	J-F. Aubry, O. Bates, C. Boehm, K. Butts Pauly, D. Christensen, C. Cueto, P. Gélat, L. Guasch, J. Jaros, Y. Jing, R. Jones, N. Liu, P. Marty, H. Montanaro, E. Neufeld, S. Pichardo, G. Pinton, A. Pulkkinen, A. Stanziola, A. Thielscher, B. E. Treeby, E. van t'Wout Benchmark problems for transcranial ultrasound simulation: Intercomparison of compressional wave models Journal Article In: J. Acoust. Soc. Am., 152 (2), pp. 1004–1019, 2022. Links \| BibTeX @article{2022-Aubry-JASA, title = {Benchmark problems for transcranial ultrasound simulation: Intercomparison of compressional wave models}, author = {J-F. Aubry and O. Bates and C. Boehm and K. Butts Pauly and D. Christensen and C. Cueto and P. Gélat and L. Guasch and J. Jaros and Y. Jing and R. Jones and N. Liu and P. Marty and H. Montanaro and E. Neufeld and S. Pichardo and G. Pinton and A. Pulkkinen and A. Stanziola and A. Thielscher and B. E. Treeby and E. van t'Wout}, url = {http://bug.medphys.ucl.ac.uk/papers/2022-Aubry-JASA}, doi = {10.1121/10.0013426}, year = {2022}, date = {2022-07-22}, journal = {J. Acoust. Soc. Am.}, volume = {152}, number = {2}, pages = {1004–1019}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2022-Aubry-JASA doi:10.1121/10.0013426 Close
13.	F. Lucka, M. Perez Liva, B. E. Treeby, B. T. Cox High resolution 3D ultrasonic breast imaging by time-domain full waveform inversion Journal Article In: Inverse Problems, 38 (2), pp. 025008, 2022. Links \| BibTeX @article{2022-Lucka-IP, title = {High resolution 3D ultrasonic breast imaging by time-domain full waveform inversion}, author = {F. Lucka and M. {Perez Liva} and B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2022-Lucka-IP.pdf}, doi = {10.1088/1361-6420/ac3b64}, year = {2022}, date = {2022-01-01}, journal = {Inverse Problems}, volume = {38}, number = {2}, pages = {025008}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2022-Lucka-IP.pdf doi:10.1088/1361-6420/ac3b64 Close
14.	M. Bakaric, P. Miloro, A. Javaherian, B. T. Cox, B. E. Treeby, M. D. Brown Measurement of the ultrasound attenuation and dispersion in 3D-printed photopolymer materials from 1 to 3.5 MHz Journal Article In: J. Acoust. Soc. Am., 150 (4), pp. 2798-2805, 2021. Links \| BibTeX @article{2021-Bakaric-JASA, title = {Measurement of the ultrasound attenuation and dispersion in 3D-printed photopolymer materials from 1 to 3.5 MHz}, author = {M. Bakaric and P. Miloro and A. Javaherian and B. T. Cox and B. E. Treeby and M. D. Brown}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Bakaric-JASA.pdf}, doi = {10.1121/10.0006668}, year = {2021}, date = {2021-10-14}, journal = {J. Acoust. Soc. Am.}, volume = {150}, number = {4}, pages = {2798-2805}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Bakaric-JASA.pdf doi:10.1121/10.0006668 Close
15.	S. Singh, E. Martin, H. F. J. Tregidgo, B. E. Treeby, S. Bandula Prostatic calcifications: Quantifying occurrence, radiodensity, and spatial distribution in prostate cancer patients Journal Article In: Urologic Oncology: Seminars and Original Investigations, 39 (10), pp. 728.e1-e6, 2021. Links \| BibTeX @article{2021-Singh-UO, title = {Prostatic calcifications: Quantifying occurrence, radiodensity, and spatial distribution in prostate cancer patients}, author = {S. Singh and E. Martin and H. F. J. Tregidgo and B. E. Treeby and S. Bandula}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Singh-UO.pdf}, doi = {10.1016/j.urolonc.2020.12.028}, year = {2021}, date = {2021-10-01}, journal = {Urologic Oncology: Seminars and Original Investigations}, volume = {39}, number = {10}, pages = {728.e1-e6}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Singh-UO.pdf doi:10.1016/j.urolonc.2020.12.028 Close
16.	A. Johnstone, T. Nandi, E. Martin, S. Bestmann, C. J. Stagg, B. E. Treeby A range of pulses commonly used for human transcranial ultrasound stimulation are clearly audible Journal Article In: Brain Stimulation, 14 (5), pp. P1353-1355, 2021. Links \| BibTeX @article{2021-Johnstone-BS, title = {A range of pulses commonly used for human transcranial ultrasound stimulation are clearly audible}, author = {A. Johnstone and T. Nandi and E. Martin and S. Bestmann and C. J. Stagg and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Johnstone-BS.pdf}, doi = {10.1016/j.brs.2021.08.015}, year = {2021}, date = {2021-09-01}, journal = {Brain Stimulation}, volume = {14}, number = {5}, pages = {P1353-1355}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Johnstone-BS.pdf doi:10.1016/j.brs.2021.08.015 Close
17.	A. Stanziola, S. R. Arridge, B. T. Cox, B. E. Treeby A Helmholtz equation solver using unsupervised learning: Application to transcranial ultrasound Journal Article In: J. Comput. Phys., 441 , pp. 110430, 2021. Links \| BibTeX @article{2021-Stanziola-JCP, title = {A Helmholtz equation solver using unsupervised learning: Application to transcranial ultrasound}, author = {A. Stanziola and S. R. Arridge and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Stanziola-JCP.pdf}, doi = {10.1016/j.jcp.2021.110430}, year = {2021}, date = {2021-05-21}, journal = {J. Comput. Phys.}, volume = {441}, pages = {110430}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Stanziola-JCP.pdf doi:10.1016/j.jcp.2021.110430 Close
18.	E. Aytac-Kipergil, A. E. Desjardins, B. E. Treeby, S. Noimark, I. P. Parkin, E. J. Alles Modelling and measurement of laser-generated focused ultrasound: Can interventional transducers achieve therapeutic effects? Journal Article In: J. Acoust. Soc. Am., 149 (4), pp. 2732-2742, 2021. Links \| BibTeX @article{2021-Aytac-Kipergil-JASA, title = {Modelling and measurement of laser-generated focused ultrasound: Can interventional transducers achieve therapeutic effects?}, author = {E. Aytac-Kipergil and A. E. Desjardins and B. E. Treeby and S. Noimark and I. P. Parkin and E. J. Alles}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Aytac-Kipergil-JASA.pdf}, doi = {doi.org/10.1121/10.0004302}, year = {2021}, date = {2021-04-20}, journal = {J. Acoust. Soc. Am.}, volume = {149}, number = {4}, pages = {2732-2742}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Aytac-Kipergil-JASA.pdf doi:doi.org/10.1121/10.0004302 Close
19.	M. Bakaric, P. Fromme, A. Hurrell, S. Rajagopal, P. Miloro, B. Zeqiri, B. T. Cox, B. E. Treeby Measurement of the temperature-dependent output of lead zirconate titanate transducers Journal Article In: Ultrasonics, 114 , pp. 106378, 2021. Links \| BibTeX @article{2021-Bakaric-ULTRASONICS, title = {Measurement of the temperature-dependent output of lead zirconate titanate transducers}, author = {M. Bakaric and P. Fromme and A. Hurrell and S. Rajagopal and P. Miloro and B. Zeqiri and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Bakaric-ULTRASONICS.pdf}, doi = {10.1016/j.ultras.2021.106378}, year = {2021}, date = {2021-02-05}, journal = {Ultrasonics}, volume = {114}, pages = {106378}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Bakaric-ULTRASONICS.pdf doi:10.1016/j.ultras.2021.106378 Close
20.	E. Martin, M. Roberts, B. E. Treeby Measurement and simulation of steered acoustic fields generated by a multielement array for therapeutic ultrasound Journal Article In: JASA Express Lett., 2021. Links \| BibTeX @article{2021-Martin-JASAEL, title = {Measurement and simulation of steered acoustic fields generated by a multielement array for therapeutic ultrasound}, author = {E. Martin and M. Roberts and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Martin-JASAEL.pdf}, doi = {10.1121/10.0003210}, year = {2021}, date = {2021-01-11}, journal = {JASA Express Lett.}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Martin-JASAEL.pdf doi:10.1121/10.0003210 Close
21.	B. E. Treeby, E. S. Wise, F. Kuklis, J. Jaros, B. T. Cox Nonlinear ultrasound simulation in an axisymmetric coordinate system using a k-space pseudospectral method Journal Article In: J. Acoust. Soc. Am., 148 (4), pp. 2288-2300, 2020. Links \| BibTeX @article{2020-Treeby-JASA, title = {Nonlinear ultrasound simulation in an axisymmetric coordinate system using a k-space pseudospectral method}, author = {B. E. Treeby and E. S. Wise and F. Kuklis and J. Jaros and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2020-Treeby-JASA.pdf}, doi = {10.1121/10.0002177}, year = {2020}, date = {2020-10-23}, journal = {J. Acoust. Soc. Am.}, volume = {148}, number = {4}, pages = {2288-2300}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2020-Treeby-JASA.pdf doi:10.1121/10.0002177 Close
22.	E. S. Wise, J. Jaros, B. T. Cox, B. E. Treeby Pseudospectral Time-Domain (PSTD) Methods for the Wave Equation: Realizing Boundary Conditions with Discrete Sine and Cosine Transforms Journal Article In: Journal of Theoretical and Computational Acoustics, pp. 2050021, 2020. Links \| BibTeX @article{2020-Wise-JTCA, title = {Pseudospectral Time-Domain (PSTD) Methods for the Wave Equation: Realizing Boundary Conditions with Discrete Sine and Cosine Transforms}, author = {E. S. Wise and J. Jaros and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2020-Wise-JTCA-preprint.pdf}, doi = {10.1142/S2591728520500218}, year = {2020}, date = {2020-10-19}, journal = {Journal of Theoretical and Computational Acoustics}, pages = {2050021}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2020-Wise-JTCA-preprint.pdf doi:10.1142/S2591728520500218 Close
23.	M. D. Brown, B. T. Cox, B. E. Treeby Stackable acoustic holograms Journal Article In: Appl. Phys. Lett., 116 , pp. 261901, 2020. Links \| BibTeX @article{2020-Brown-APL, title = {Stackable acoustic holograms}, author = {M. D. Brown and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2020-Brown-APL.pdf}, doi = {10.1063/5.0009829}, year = {2020}, date = {2020-06-29}, journal = {Appl. Phys. Lett.}, volume = {116}, pages = {261901}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2020-Brown-APL.pdf doi:10.1063/5.0009829 Close
24.	M. Bakaric, P. Miloro, B. Zeqiri, B. T. Cox, B. E. Treeby The effect of curing temperature and time on the acoustic and optical properties of PVCP Journal Article In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 67 (3), pp. 505-512, 2020. Links \| BibTeX @article{2020-Bakaric-IEEETUFFC, title = {The effect of curing temperature and time on the acoustic and optical properties of PVCP}, author = {M. Bakaric and P. Miloro and B. Zeqiri and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2020-Bakaric-IEEETUFFC.pdf}, doi = {10.1109/TUFFC.2019.2947341}, year = {2020}, date = {2020-03-01}, journal = {IEEE Trans. Ultrason. Ferroelectr. Freq. Control}, volume = {67}, number = {3}, pages = {505-512}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2020-Bakaric-IEEETUFFC.pdf doi:10.1109/TUFFC.2019.2947341 Close
25.	D. R. Ramasawmy, B. T. Cox, B. E. Treeby ElasticMatrix: A MATLAB toolbox for anisotropic elastic wave propagation in layered media Journal Article In: SoftwareX, 11 , pp. 100397, 2020. Links \| BibTeX @article{2020-Ramasawmy-SOFTWAREX, title = {ElasticMatrix: A MATLAB toolbox for anisotropic elastic wave propagation in layered media}, author = {D. R. Ramasawmy and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2020-Ramasawmy-SOFTWAREX.pdf}, doi = {10.1016/j.softx.2020.100397}, year = {2020}, date = {2020-01-03}, journal = {SoftwareX}, volume = {11}, pages = {100397}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2020-Ramasawmy-SOFTWAREX.pdf doi:10.1016/j.softx.2020.100397 Close
26.	E. Martin, J. Jaros, B. E. Treeby Experimental validation of k-Wave: Nonlinear wave propagation in layered, absorbing fluid media Journal Article In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 67 (1), pp. 81-91, 2020. Links \| BibTeX @article{2020-Martin-IEEETUFFC, title = {Experimental validation of k-Wave: Nonlinear wave propagation in layered, absorbing fluid media}, author = {E. Martin and J. Jaros and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2020-Martin-IEEETUFFC.pdf}, doi = {10.1109/TUFFC.2019.2941795}, year = {2020}, date = {2020-01-01}, journal = {IEEE Trans. Ultrason. Ferroelectr. Freq. Control}, volume = {67}, number = {1}, pages = {81-91}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2020-Martin-IEEETUFFC.pdf doi:10.1109/TUFFC.2019.2941795 Close
27.	E. S. Wise, B. T. Cox, J. Jaros, B. E. Treeby Representing arbitrary acoustic source and sensor distributions in Fourier collocation methods Journal Article In: J. Acoust. Soc. Am., 146 (1), pp. 278-288, 2019. Links \| BibTeX @article{2019-Wise-JASA, title = {Representing arbitrary acoustic source and sensor distributions in Fourier collocation methods}, author = {E. S. Wise and B. T. Cox and J. Jaros and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2019-Wise-JASA.pdf}, doi = {10.1121/1.5116132}, year = {2019}, date = {2019-07-19}, journal = {J. Acoust. Soc. Am.}, volume = {146}, number = {1}, pages = {278-288}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2019-Wise-JASA.pdf doi:10.1121/1.5116132 Close
28.	M. D. Brown, E. Z. Zhang, B. E. Treeby, P. C. Beard, B. T. Cox Reverberant cavity photoacoustic imaging Journal Article In: Optica, 6 (6), pp. 821-822, 2019. Links \| BibTeX @article{2019-Brown-OPTICA, title = {Reverberant cavity photoacoustic imaging}, author = {M. D. Brown and E. Z. Zhang and B. E. Treeby and P. C. Beard and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2019-Brown-OPTICA.pdf}, doi = {10.1364/OPTICA.6.000821}, year = {2019}, date = {2019-06-19}, journal = {Optica}, volume = {6}, number = {6}, pages = {821-822}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2019-Brown-OPTICA.pdf doi:10.1364/OPTICA.6.000821 Close
29.	B. E. Treeby, J. Jaros, E. Martin, B. T. Cox From biology to bytes: Predicting the path of ultrasound waves through the human body Journal Article In: Acoustics Today, 15 (2), pp. 36-44, 2019. Links \| BibTeX @article{2019-Treeby-AT, title = {From biology to bytes: Predicting the path of ultrasound waves through the human body}, author = {B. E. Treeby and J. Jaros and E. Martin and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2019-Treeby-AT.pdf}, doi = {10.1121/AT.2019.15.2.36}, year = {2019}, date = {2019-06-14}, journal = {Acoustics Today}, volume = {15}, number = {2}, pages = {36-44}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2019-Treeby-AT.pdf doi:10.1121/AT.2019.15.2.36 Close
30.	D. R. Ramasawmy, E. Martin, J. A. Guggenheim, E. Z. Zhang, P. C. Beard, B. E. Treeby, B. T. Cox Analysis of the Directivity of Glass-Etalon Fabry-Perot Ultrasound Sensors Journal Article In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 66 (9), pp. 1504-1513, 2019. Links \| BibTeX @article{2019-Ramasawmy-IEEETUFFC, title = {Analysis of the Directivity of Glass-Etalon Fabry-Perot Ultrasound Sensors}, author = {D. R. Ramasawmy and E. Martin and J. A. Guggenheim and E. Z. Zhang and P. C. Beard and B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2019-Ramasawmy-IEEETUFFC.pdf}, doi = {10.1109/TUFFC.2019.2921735}, year = {2019}, date = {2019-06-07}, journal = {IEEE Trans. Ultrason. Ferroelectr. Freq. Control}, volume = {66}, number = {9}, pages = {1504-1513}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2019-Ramasawmy-IEEETUFFC.pdf doi:10.1109/TUFFC.2019.2921735 Close
31.	E. Martin, B. E. Treeby Investigation of the repeatability and reproducibility of hydrophone measurements of medical ultrasound fields Journal Article In: J. Acoust. Soc. Am., 145 (3), pp. 1270-1282, 2019. Links \| BibTeX @article{2019-Martin-JASA, title = {Investigation of the repeatability and reproducibility of hydrophone measurements of medical ultrasound fields}, author = {E. Martin and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2019-Martin-JASA.pdf}, doi = {10.1121/1.5093306}, year = {2019}, date = {2019-03-07}, journal = {J. Acoust. Soc. Am.}, volume = {145}, number = {3}, pages = {1270-1282}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2019-Martin-JASA.pdf doi:10.1121/1.5093306 Close
32.	V. Suomi, J. Jaros, B. E. Treeby, R. Cleveland Full modeling of high-intensity focused ultrasound and thermal heating in the kidney using realistic patient models Journal Article In: IEEE Trans. Biomed. Eng., 65 (11), pp. 2660-2670, 2018. Links \| BibTeX @article{2018-Suomi-IEEETBE, title = {Full modeling of high-intensity focused ultrasound and thermal heating in the kidney using realistic patient models}, author = {V. Suomi and J. Jaros and B. E. Treeby and R. Cleveland}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Suomi-IEEETBE.pdf}, doi = {10.1109/TBME.2018.2870064}, year = {2018}, date = {2018-11-01}, journal = {IEEE Trans. Biomed. Eng.}, volume = {65}, number = {11}, pages = {2660-2670}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Suomi-IEEETBE.pdf doi:10.1109/TBME.2018.2870064 Close
33.	V. Suomi, B. E. Treeby, J. Jaros, P. Makela, M. Anttinen, J. Saunavaara, T. Sainio, A. Kiviniemi, R. Blanco Transurethral ultrasound therapy of the prostate in the presence of calcifications: A simulation study Journal Article In: Med. Phys., 45 (11), pp. 4793-4805, 2018. Links \| BibTeX @article{2018-Suomi-MP, title = {Transurethral ultrasound therapy of the prostate in the presence of calcifications: A simulation study}, author = {V. Suomi and B. E. Treeby and J. Jaros and P. Makela and M. Anttinen and J. Saunavaara and T. Sainio and A. Kiviniemi and R. Blanco}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Suomi-MP.pdf}, doi = {10.1002/mp.13183}, year = {2018}, date = {2018-11-01}, journal = {Med. Phys.}, volume = {45}, number = {11}, pages = {4793-4805}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Suomi-MP.pdf doi:10.1002/mp.13183 Close
34.	E. S. Wise, B. T. Cox, B. E. Treeby Bandwidth-based mesh adaptation in multiple dimensions Journal Article In: J. Comp. Phys., 371 , pp. 651-662, 2018. Links \| BibTeX @article{Wise2018, title = {Bandwidth-based mesh adaptation in multiple dimensions}, author = {E. S. Wise and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Wise-JCP.pdf}, doi = {10.1016/j.jcp.2018.06.009}, year = {2018}, date = {2018-10-15}, journal = {J. Comp. Phys.}, volume = {371}, pages = {651-662}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Wise-JCP.pdf doi:10.1016/j.jcp.2018.06.009 Close
35.	B. E. Treeby, F. Lucka, E. Martin, B. T. Cox Equivalent-source acoustic holography for projecting measured ultrasound fields through complex media Journal Article In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 65 (10), pp. 1857-1864, 2018. Links \| BibTeX @article{2018-Treeby-IEEETUFFC, title = {Equivalent-source acoustic holography for projecting measured ultrasound fields through complex media}, author = {B. E. Treeby and F. Lucka and E. Martin and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Treeby-IEEETUFFC.pdf}, doi = {10.1109/TUFFC.2018.2861895}, year = {2018}, date = {2018-10-01}, journal = {IEEE Trans. Ultrason. Ferroelectr. Freq. Control}, volume = {65}, number = {10}, pages = {1857-1864}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Treeby-IEEETUFFC.pdf doi:10.1109/TUFFC.2018.2861895 Close
36.	B. E. Treeby, E. S. Wise, B. T. Cox Nonstandard Fourier Pseudospectral Time Domain (PSTD) Schemes for Partial Differential Equations Journal Article In: Commun. Comput. Phys., 24 (3), pp. 623-634, 2018. Links \| BibTeX @article{2018-Treeby-CCP, title = {Nonstandard Fourier Pseudospectral Time Domain (PSTD) Schemes for Partial Differential Equations}, author = {B. E. Treeby and E. S. Wise and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Treeby-CCP.pdf}, doi = {10.4208/cicp.OA-2017-0192}, year = {2018}, date = {2018-09-01}, journal = {Commun. Comput. Phys.}, volume = {24}, number = {3}, pages = {623-634}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Treeby-CCP.pdf doi:10.4208/cicp.OA-2017-0192 Close
37.	S. Rajagopal, T. Sainsbury, B. E. Treeby, B. T. Cox Laser generated ultrasound sources using carbon-polymer nanocomposites for high frequency metrology Journal Article In: J. Acoust. Soc. Am., 144 (2), pp. 584-597, 2018. Links \| BibTeX @article{Rajagopal2018, title = {Laser generated ultrasound sources using carbon-polymer nanocomposites for high frequency metrology}, author = {S. Rajagopal and T. Sainsbury and B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Rajagopal-JASA.pdf}, doi = {10.1121/1.5048413}, year = {2018}, date = {2018-08-03}, journal = {J. Acoust. Soc. Am.}, volume = {144}, number = {2}, pages = {584-597}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Rajagopal-JASA.pdf doi:10.1121/1.5048413 Close
38.	J. L. Robertson, J. Urban, J. Stitzel, B. E. Treeby The effects of image homogenisation on simulated transcranial ultrasound propagation Journal Article In: Phys. Med. Biol., 63 , pp. 145014, 2018. Links \| BibTeX @article{Robertson2018, title = {The effects of image homogenisation on simulated transcranial ultrasound propagation}, author = {J. L. Robertson and J. Urban and J. Stitzel and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Robertson-PMB.pdf}, doi = {10.1088/1361-6560/aacc33}, year = {2018}, date = {2018-07-16}, journal = {Phys. Med. Biol.}, volume = {63}, pages = {145014}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Robertson-PMB.pdf doi:10.1088/1361-6560/aacc33 Close
39.	M. Bakaric, E. Martin, P. S. Georgiou, B. T. Cox, H. Payne, B. E. Treeby Experimental study of beam distortion due to fiducial markers during salvage HIFU in the prostate Journal Article In: Journal of Therapeutic Ultrasound, 6 (1), pp. 1-12, 2018. Links \| BibTeX @article{Bakaric2018, title = {Experimental study of beam distortion due to fiducial markers during salvage HIFU in the prostate}, author = {M. Bakaric and E. Martin and P. S. Georgiou and B. T. Cox and H. Payne and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Bakaric-JTU.pdf}, doi = {10.1186/s40349-018-0109-3}, year = {2018}, date = {2018-03-22}, journal = {Journal of Therapeutic Ultrasound}, volume = {6}, number = {1}, pages = {1-12}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Bakaric-JTU.pdf doi:10.1186/s40349-018-0109-3 Close
40.	B. E. Treeby, J. Budisky, E. S. Wise, J. Jaros, B. T. Cox Rapid calculation of acoustic fields from arbitrary continuous-wave sources Journal Article In: J. Acoust. Soc. Am., 143 (1), pp. 529-537, 2018. Links \| BibTeX @article{2018-Treeby-JASA, title = {Rapid calculation of acoustic fields from arbitrary continuous-wave sources}, author = {B. E. Treeby and J. Budisky and E. S. Wise and J. Jaros and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Treeby-JASA.pdf}, doi = {10.1121/1.5021245}, year = {2018}, date = {2018-01-30}, journal = {J. Acoust. Soc. Am.}, volume = {143}, number = {1}, pages = {529-537}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Treeby-JASA.pdf doi:10.1121/1.5021245 Close
41.	M. D. Brown, B. T. Cox, B. E. Treeby Design of multi-frequency acoustic kinoforms Journal Article In: Appl. Phys. Lett., 111 (24), pp. 244101, 2017. Links \| BibTeX @article{Brown2017b, title = {Design of multi-frequency acoustic kinoforms}, author = {M. D. Brown and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Brown-APL-2.pdf}, doi = {10.1063/1.5004040}, year = {2017}, date = {2017-12-11}, journal = { Appl. Phys. Lett.}, volume = {111}, number = {24}, pages = {244101}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Brown-APL-2.pdf doi:10.1063/1.5004040 Close
42.	E. Martin, E. Z. Zhang, J. A. Guggenheim, P. C. Beard, B. E. Treeby Rapid spatial mapping of focused ultrasound fields using a planar Fabry-Perot sensor Journal Article In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 64 (11), pp. 1711-1722, 2017. Links \| BibTeX @article{Martin2017, title = {Rapid spatial mapping of focused ultrasound fields using a planar Fabry-Perot sensor}, author = {E. Martin and E. Z. Zhang and J. A. Guggenheim and P. C. Beard and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Martin-IEEETUFFC.pdf}, doi = {10.1109/TUFFC.2017.2748886}, year = {2017}, date = {2017-11-01}, journal = {IEEE Trans. Ultrason. Ferroelectr. Freq. Control}, volume = {64}, number = {11}, pages = {1711-1722}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Martin-IEEETUFFC.pdf doi:10.1109/TUFFC.2017.2748886 Close
43.	E. S. Wise, B. T. Cox, B. E. Treeby Mesh density functions based on local bandwidth applied to moving mesh methods Journal Article In: Commun. Comput. Phys., 22 (5), pp. 1286-1308, 2017. Links \| BibTeX @article{Wise2017, title = {Mesh density functions based on local bandwidth applied to moving mesh methods}, author = {E. S. Wise and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Wise-CCP.pdf}, doi = {10.4208/cicp.OA-2016-0246}, year = {2017}, date = {2017-08-21}, journal = {Commun. Comput. Phys.}, volume = {22}, number = {5}, pages = {1286-1308}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Wise-CCP.pdf doi:10.4208/cicp.OA-2016-0246 Close
44.	J. L. Robertson, B. T. Cox, J. Jaros, B. E. Treeby Accurate simulation of transcranial ultrasound propagation for ultrasonic neuromodulation and stimulation Journal Article In: J. Acoust. Soc. Am., 141 (3), pp. 1726-1738, 2017. Links \| BibTeX @article{Robertson2017b, title = {Accurate simulation of transcranial ultrasound propagation for ultrasonic neuromodulation and stimulation}, author = {J. L. Robertson and B. T. Cox and J. Jaros and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Robertson-JASA.pdf}, doi = {10.1121/1.4976339}, year = {2017}, date = {2017-03-13}, journal = {J. Acoust. Soc. Am.}, volume = {141}, number = {3}, pages = {1726-1738}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Robertson-JASA.pdf doi:10.1121/1.4976339 Close
45.	M. Perez Liva, J. L. Herraiz, J. M. Udias, E. Miller, B. T. Cox, B. E. Treeby Time domain reconstruction of sound speed and attenuation in ultrasound computed tomography using full wave inversion Journal Article In: J. Acoust. Soc. Am., 141 (3), pp. 1595-1604, 2017. Links \| BibTeX @article{Perez-Liva2017, title = {Time domain reconstruction of sound speed and attenuation in ultrasound computed tomography using full wave inversion}, author = {M. {Perez Liva} and J. L. Herraiz and J. M. Udias and E. Miller and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Perez-Liva-JASA.pdf}, doi = {10.1121/1.4976688}, year = {2017}, date = {2017-03-08}, journal = {J. Acoust. Soc. Am.}, volume = {141}, number = {3}, pages = {1595-1604}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Perez-Liva-JASA.pdf doi:10.1121/1.4976688 Close
46.	J. L. Robertson, E. Martin, B. T. Cox, B. E. Treeby Sensitivity of simulated transcranial ultrasound fields to acoustic medium property maps Journal Article In: Phys. Med. Biol., 62 (7), pp. 2559-2580, 2017. Links \| BibTeX @article{Robertson2017, title = {Sensitivity of simulated transcranial ultrasound fields to acoustic medium property maps}, author = {J. L. Robertson and E. Martin and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Robertson-PMB.pdf}, doi = {10.1088/1361-6560/aa5e98}, year = {2017}, date = {2017-03-01}, journal = {Phys. Med. Biol.}, volume = {62}, number = {7}, pages = {2559-2580}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Robertson-PMB.pdf doi:10.1088/1361-6560/aa5e98 Close
47.	M. D. Brown, D. I. Nikitichev, B. E. Treeby, B. T. Cox Generating arbitrary ultrasound fields with tailored optoacoustic surface profiles Journal Article In: Appl. Phys. Lett., 110 (9), pp. 094102, 2017. Links \| BibTeX @article{Brown2017, title = {Generating arbitrary ultrasound fields with tailored optoacoustic surface profiles}, author = {M. D. Brown and D. I. Nikitichev and B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Brown-APL.pdf}, doi = {10.1063/1.4976942}, year = {2017}, date = {2017-02-28}, journal = {Appl. Phys. Lett.}, volume = {110}, number = {9}, pages = {094102}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Brown-APL.pdf doi:10.1063/1.4976942 Close
48.	P. S. Georgiou, J. Jaros, H. Payne, C. Allen, T. T. Shah, H. U. Ahmed, E. Gibson, D. Barratt, B. E. Treeby Beam distortion due to gold fiducial markers during salvage high-intensity focused ultrasound in the prostate Journal Article In: Med. Phys., 44 (2), pp. 679–693, 2017. Links \| BibTeX @article{Georgiou2017, title = {Beam distortion due to gold fiducial markers during salvage high-intensity focused ultrasound in the prostate}, author = {P. S. Georgiou and J. Jaros and H. Payne and C. Allen and T. T. Shah and H. U. Ahmed and E. Gibson and D. Barratt and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Georgiou-MP.pdf}, doi = {10.1002/mp.12044}, year = {2017}, date = {2017-02-01}, journal = {Med. Phys.}, volume = {44}, number = {2}, pages = {679–693}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Georgiou-MP.pdf doi:10.1002/mp.12044 Close
49.	J. Jaros, F. Vaverka, B. E. Treeby Spectral domain decomposition using local Fourier basis: Application to ultrasound simulation on a cluster of GPUs Journal Article In: Supercomputing Frontiers and Innovations, 3 (3), pp. 39–54, 2016. Links \| BibTeX @article{Jaros2016b, title = {Spectral domain decomposition using local Fourier basis: Application to ultrasound simulation on a cluster of GPUs}, author = {J. Jaros and F. Vaverka and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2016-Jaros-JSF.pdf}, doi = {10.14529/jsfi160305}, year = {2016}, date = {2016-11-01}, journal = {Supercomputing Frontiers and Innovations}, volume = {3}, number = {3}, pages = {39--54}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2016-Jaros-JSF.pdf doi:10.14529/jsfi160305 Close
50.	S. R. Arridge, M. M. Betcke, B. T. Cox, F. Lucka, B. E. Treeby On the adjoint operator in photoacoustic tomography Journal Article In: Inv. Problems, 32 (11), pp. 115012, 2016. Links \| BibTeX @article{Arridge2016, title = {On the adjoint operator in photoacoustic tomography}, author = {S. R. Arridge and M. M. Betcke and B. T. Cox and F. Lucka and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2016-Arridge-INVPROB.pdf}, doi = {10.1088/0266-5611/32/11/115012}, year = {2016}, date = {2016-10-03}, journal = {Inv. Problems}, volume = {32}, number = {11}, pages = {115012}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2016-Arridge-INVPROB.pdf doi:10.1088/0266-5611/32/11/115012 Close
51.	E. Martin, Y. T. Ling, B. E. Treeby Simulating focused ultrasound transducers using discrete sources on regular cartesian grids Journal Article In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 63 (10), pp. 1535–1542, 2016. Links \| BibTeX @article{Martin2016, title = {Simulating focused ultrasound transducers using discrete sources on regular cartesian grids}, author = {E. Martin and Y. T. Ling and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2016-Martin-IEEETUFFC.pdf}, doi = { 10.1109/TUFFC.2016.2600862}, year = {2016}, date = {2016-08-16}, journal = {IEEE Trans. Ultrason. Ferroelectr. Freq. Control}, volume = {63}, number = {10}, pages = {1535--1542}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2016-Martin-IEEETUFFC.pdf doi: 10.1109/TUFFC.2016.2600862 Close
52.	J. Jaros, A. P. Rendell, B. E. Treeby Full-wave nonlinear ultrasound simulation on distributed clusters with applications in high-intensity focused ultrasound Journal Article In: Int. J. High Perform. Comput., 30 (2), pp. 137–155, 2016. Links \| BibTeX @article{Jaros2016, title = {Full-wave nonlinear ultrasound simulation on distributed clusters with applications in high-intensity focused ultrasound}, author = {J. Jaros and A. P. Rendell and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2016-Jaros-IJHPCA.pdf}, doi = {10.1177/1094342015581024}, year = {2016}, date = {2016-04-18}, journal = {Int. J. High Perform. Comput.}, volume = {30}, number = {2}, pages = {137--155}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2016-Jaros-IJHPCA.pdf doi:10.1177/1094342015581024 Close
53.	M. D. Brown, J. Jaros, B. T. Cox, B. E. Treeby Control of broadband optically generated ultrasound pulses using binary amplitude holograms Journal Article In: J. Acoust. Soc. Am., 139 (4), pp. 1637–1467, 2016. Links \| BibTeX @article{Brown2016, title = {Control of broadband optically generated ultrasound pulses using binary amplitude holograms}, author = {M. D. Brown and J. Jaros and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2016-Brown-JASA.pdf}, doi = {10.1121/1.4944758}, year = {2016}, date = {2016-04-06}, journal = {J. Acoust. Soc. Am.}, volume = {139}, number = {4}, pages = {1637--1467}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2016-Brown-JASA.pdf doi:10.1121/1.4944758 Close
54.	A. P. Jathoul, J. Laufer, O. Ogunlade, B. E. Treeby, B. T. Cox, E. Z. Zhang, P. Johnson, A. R. Pizzey, B. Philip, T. Marafioti, M. F. Lythgoe, R. B. Pedley, M. A. Pule, P. C. Beard Deep in vivo photoacoustic imaging of mammalian tissues using a tyrosinase-based genetic reporter Journal Article In: Nature Photonics, 9 , pp. 239–-246, 2015. Links \| BibTeX @article{Jathoul2015, title = {Deep in vivo photoacoustic imaging of mammalian tissues using a tyrosinase-based genetic reporter}, author = {A. P. Jathoul and J. Laufer and O. Ogunlade and B. E. Treeby and B. T. Cox and E. Z. Zhang and P. Johnson and A. R. Pizzey and B. Philip and T. Marafioti and M. F. Lythgoe and R. B. Pedley and M. A. Pule and P. C. Beard}, url = {http://bug.medphys.ucl.ac.uk/papers/2015-Jathoul-NATPH.pdf}, doi = {10.1038/nphoton.2015.22}, year = {2015}, date = {2015-03-02}, journal = {Nature Photonics}, volume = {9}, pages = {239–-246}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2015-Jathoul-NATPH.pdf doi:10.1038/nphoton.2015.22 Close
55.	B. E. Treeby, B. T. Cox Modeling power law absorption and dispersion in viscoelastic solids using a split-field and the fractional Laplacian Journal Article In: J. Acoust. Soc. Am., 136 (4), pp. 1499-1510, 2014. Links \| BibTeX @article{Treeby2014, title = {Modeling power law absorption and dispersion in viscoelastic solids using a split-field and the fractional Laplacian}, author = {B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2014-Treeby-JASA.pdf}, doi = {10.1121/1.4894790}, year = {2014}, date = {2014-08-16}, journal = {J. Acoust. Soc. Am.}, volume = {136}, number = {4}, pages = {1499-1510}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2014-Treeby-JASA.pdf doi:10.1121/1.4894790 Close
56.	R. J. Colchester, C. A. Mosse, D. S. Bhachu, J. C. Bear, C. J. Carmalt, I. P. Parkin, B. E. Treeby, I. Papakonstantinou, A. E. Desjardins Laser-generated ultrasound with optical fibres using functionalised carbon nanotube composite coatings Journal Article In: Appl. Phys. Let., 104 , pp. 173502, 2014. Links \| BibTeX @article{Colchester2014, title = {Laser-generated ultrasound with optical fibres using functionalised carbon nanotube composite coatings}, author = {R. J. Colchester and C. A. Mosse and D. S. Bhachu and J. C. Bear and C. J. Carmalt and I. P. Parkin and B. E. Treeby and I. Papakonstantinou and A. E. Desjardins}, url = {http://bug.medphys.ucl.ac.uk/papers/2014-Colchester-APL.pdf}, doi = {10.1063/1.4873678}, year = {2014}, date = {2014-04-29}, journal = {Appl. Phys. Let.}, volume = {104}, pages = {173502}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2014-Colchester-APL.pdf doi:10.1063/1.4873678 Close
57.	B. E. Treeby Modeling nonlinear wave propagation on nonuniform grids using a mapped k-space pseudospectral method Journal Article In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 60 (10), pp. 2208–2213, 2013. Links \| BibTeX @article{Treeby2013a, title = {Modeling nonlinear wave propagation on nonuniform grids using a mapped k-space pseudospectral method}, author = {B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2013-Treeby-IEEETUFFC.pdf}, doi = {10.1109/TUFFC.2013.2812}, year = {2013}, date = {2013-10-01}, journal = {IEEE Trans. Ultrason. Ferroelectr. Freq. Control}, volume = {60}, number = {10}, pages = {2208--2213}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2013-Treeby-IEEETUFFC.pdf doi:10.1109/TUFFC.2013.2812 Close
58.	B. E. Treeby Acoustic attenuation compensation in photoacoustic tomography using time-variant filtering Journal Article In: J. Biomed. Opt., 18 (3), pp. 036008, 2013. Links \| BibTeX @article{Treeby2013b, title = {Acoustic attenuation compensation in photoacoustic tomography using time-variant filtering}, author = {B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2013-Treeby-JBO.pdf}, doi = {10.1117/1.JBO.18.3.036008}, year = {2013}, date = {2013-03-01}, journal = {J. Biomed. Opt.}, volume = {18}, number = {3}, pages = {036008}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2013-Treeby-JBO.pdf doi:10.1117/1.JBO.18.3.036008 Close
59.	K. Firouzi, B. T. Cox, B. E. Treeby, N. Saffari A first-order k-space model for elastic wave propagation in heterogeneous media Journal Article In: J. Acoust. Soc. Am., 132 (3), pp. 1271–1283, 2012. Links \| BibTeX @article{Firouzi2012, title = {A first-order k-space model for elastic wave propagation in heterogeneous media}, author = {K. Firouzi and B. T. Cox and B. E. Treeby and N. Saffari}, url = {http://bug.medphys.ucl.ac.uk/papers/2012-Firouzi-JASA.pdf}, doi = {10.1121/1.4730897}, year = {2012}, date = {2012-09-01}, journal = {J. Acoust. Soc. Am.}, volume = {132}, number = {3}, pages = {1271--1283}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2012-Firouzi-JASA.pdf doi:10.1121/1.4730897 Close
60.	J. Laufer, P. Johnson, E. Z. Zhang, B. E. Treeby, B. T. Cox, R. B. Pedley, P. C. Beard In vivo preclinical photoacoustic imaging of tumour vasculature development and therapy Journal Article In: J. Biomed. Opt., 17 (5), pp. 056016, 2012. Links \| BibTeX @article{Laufer2012, title = {In vivo preclinical photoacoustic imaging of tumour vasculature development and therapy}, author = {J. Laufer and P. Johnson and E. Z. Zhang and B. E. Treeby and B. T. Cox and R. B. Pedley and P. C. Beard}, url = {http://bug.medphys.ucl.ac.uk/papers/2012-Laufer-JBO-I.pdf}, doi = {10.1117/1.JBO.17.5.056016}, year = {2012}, date = {2012-05-21}, journal = {J. Biomed. Opt.}, volume = {17}, number = {5}, pages = {056016}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2012-Laufer-JBO-I.pdf doi:10.1117/1.JBO.17.5.056016 Close
61.	J. Laufer, F. C. Norris, J. Cleary, E. Z. Zhang, B. E. Treeby, B. T. Cox, P. Johnson, P. Scambler, M. F. Lythgoe, P. C. Beard In vivo photoacoustic imaging of mouse embryos Journal Article In: J. Biomed. Opt., 17 (6), pp. 061220, 2012. Links \| BibTeX @article{Laufer2012a, title = {In vivo photoacoustic imaging of mouse embryos}, author = {J. Laufer and F. C. Norris and J. Cleary and E. Z. Zhang and B. E. Treeby and B. T. Cox and P. Johnson and P. Scambler and M. F. Lythgoe and P. C. Beard}, url = {http://bug.medphys.ucl.ac.uk/papers/2012-Laufer-JBO-II.pdf}, doi = {10.1117/1.JBO.17.6.061220}, year = {2012}, date = {2012-05-18}, journal = {J. Biomed. Opt.}, volume = {17}, number = {6}, pages = {061220}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2012-Laufer-JBO-II.pdf doi:10.1117/1.JBO.17.6.061220 Close
62.	D. Modgil, B. E. Treeby, P. J. La Riviere Photoacoustic image reconstruction in an attenuating medium using singular-value decomposition Journal Article In: J. Biomed. Opt., 17 (6), pp. 061204, 2012. Links \| BibTeX @article{Modgil2012, title = {Photoacoustic image reconstruction in an attenuating medium using singular-value decomposition}, author = {D. Modgil and B. E. Treeby and P. J. La Riviere}, url = {http://bug.medphys.ucl.ac.uk/papers/2012-Modgil-JBO.pdf}, doi = {10.1117/1.JBO.17.6.061204}, year = {2012}, date = {2012-05-07}, journal = {J. Biomed. Opt.}, volume = {17}, number = {6}, pages = {061204}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2012-Modgil-JBO.pdf doi:10.1117/1.JBO.17.6.061204 Close
63.	B. E. Treeby, J. Jaros, A. P. Rendell, B. T. Cox Modeling nonlinear ultrasound propagation in heterogeneous media with power law absorption using a k-space pseudospectral method Journal Article In: J. Acoust. Soc. Am., 131 (6), pp. 4324–4336, 2012. Links \| BibTeX @article{Treeby2012, title = {Modeling nonlinear ultrasound propagation in heterogeneous media with power law absorption using a k-space pseudospectral method}, author = {B. E. Treeby and J. Jaros and A. P. Rendell and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2012-Treeby-JASA.pdf}, doi = {10.1121/1.4712021}, year = {2012}, date = {2012-01-01}, journal = {J. Acoust. Soc. Am.}, volume = {131}, number = {6}, pages = {4324--4336}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2012-Treeby-JASA.pdf doi:10.1121/1.4712021 Close
64.	B. E. Treeby, T. K. Varslot, E. Z. Zhang, J. Laufer, P. C. Beard Automatic sound speed selection in photoacoustic image reconstruction using an autofocus approach Journal Article In: J. Biomed. Opt., 16 (9), pp. 090501, 2011. Links \| BibTeX @article{Treeby2011c, title = {Automatic sound speed selection in photoacoustic image reconstruction using an autofocus approach}, author = {B. E. Treeby and T. K. Varslot and E. Z. Zhang and J. Laufer and P. C. Beard}, url = {http://bug.medphys.ucl.ac.uk/papers/2011-Treeby-JBO.pdf}, doi = {10.1117/1.3619139}, year = {2011}, date = {2011-09-01}, journal = {J. Biomed. Opt.}, volume = {16}, number = {9}, pages = {090501}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2011-Treeby-JBO.pdf doi:10.1117/1.3619139 Close
65.	E. Z. Zhang, B. Povazay, J. Laufer, A. Alex, B. Hofer, R. B. Pedley, C. Glittenberg, B. E. Treeby, B. T. Cox, P. C. Beard, W. Drexler Multimodal photoacoustic and optical coherence tomography scanner using an all optical detection scheme for 3D morphological skin imaging Journal Article In: Biomed. Opt. Express, 2 (8), pp. 2202–2215, 2011. Links \| BibTeX @article{Zhang2011, title = {Multimodal photoacoustic and optical coherence tomography scanner using an all optical detection scheme for 3D morphological skin imaging}, author = {E. Z. Zhang and B. Povazay and J. Laufer and A. Alex and B. Hofer and R. B. Pedley and C. Glittenberg and B. E. Treeby and B. T. Cox and P. C. Beard and W. Drexler}, url = {http://bug.medphys.ucl.ac.uk/papers/2011-Zhang-BOE.pdf}, doi = {10.1364/BOE.2.002202}, year = {2011}, date = {2011-08-01}, journal = {Biomed. Opt. Express}, volume = {2}, number = {8}, pages = {2202--2215}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2011-Zhang-BOE.pdf doi:10.1364/BOE.2.002202 Close
66.	B. E. Treeby, B. T. Cox A k-space Green's function solution for acoustic initial value problems in homogeneous media with power law absorption Journal Article In: J. Acoust. Soc. Am., 129 (6), pp. 3652–3660, 2011. Links \| BibTeX @article{Treeby2011b, title = {A k-space Green's function solution for acoustic initial value problems in homogeneous media with power law absorption}, author = {B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2011-Treeby-JASA.pdf}, doi = {10.1121/1.3583537}, year = {2011}, date = {2011-06-01}, journal = {J. Acoust. Soc. Am.}, volume = {129}, number = {6}, pages = {3652--3660}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2011-Treeby-JASA.pdf doi:10.1121/1.3583537 Close
67.	B. E. Treeby, E. Z. Zhang, A. S. Thomas, B. T. Cox Measurement of the ultrasound attenuation and dispersion in whole human blood and its components from 0-70 MHz Journal Article In: Ultrasound Med. Biol., 37 (2), pp. 289–300, 2011. Links \| BibTeX @article{Treeby2011a, title = {Measurement of the ultrasound attenuation and dispersion in whole human blood and its components from 0-70 MHz}, author = {B. E. Treeby and E. Z. Zhang and A. S. Thomas and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2011-Treeby-UMB.pdf}, doi = {10.1016/j.ultrasmedbio.2010.10.020}, year = {2011}, date = {2011-02-01}, journal = {Ultrasound Med. Biol.}, volume = {37}, number = {2}, pages = {289--300}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2011-Treeby-UMB.pdf doi:10.1016/j.ultrasmedbio.2010.10.020 Close
68.	B. E. Treeby, B. T. Cox k-Wave: MATLAB toolbox for the simulation and reconstruction of photoacoustic wave-fields Journal Article In: J. Biomed. Opt., 15 (2), pp. 021314, 2010. Links \| BibTeX @article{Treeby2010, title = {k-Wave: MATLAB toolbox for the simulation and reconstruction of photoacoustic wave-fields}, author = {B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2010-Treeby-JBO.pdf}, doi = {10.1117/1.3360308}, year = {2010}, date = {2010-03-16}, journal = {J. Biomed. Opt.}, volume = {15}, number = {2}, pages = {021314}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2010-Treeby-JBO.pdf doi:10.1117/1.3360308 Close
69.	B. T. Cox, B. E. Treeby Artifact trapping during time reversal photoacoustic imaging for acoustically heterogeneous media Journal Article In: IEEE Trans. Med. Imaging, 29 (2), pp. 387–396, 2010. Links \| BibTeX @article{Cox2010a, title = {Artifact trapping during time reversal photoacoustic imaging for acoustically heterogeneous media}, author = {B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2010-Cox-IEEETMI.pdf}, doi = {10.1109/TMI.2009.2032358}, year = {2010}, date = {2010-02-01}, journal = {IEEE Trans. Med. Imaging}, volume = {29}, number = {2}, pages = {387--396}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2010-Cox-IEEETMI.pdf doi:10.1109/TMI.2009.2032358 Close
70.	B. E. Treeby, B. T. Cox Modeling power law absorption and dispersion for acoustic propagation using the fractional Laplacian Journal Article In: J. Acoust. Soc. Am., 127 (5), pp. 2741–2748, 2010. Links \| BibTeX @article{Treeby2010a, title = {Modeling power law absorption and dispersion for acoustic propagation using the fractional Laplacian}, author = {B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2010-Treeby-JASA.pdf}, doi = {10.1121/1.3377056}, year = {2010}, date = {2010-01-01}, journal = {J. Acoust. Soc. Am.}, volume = {127}, number = {5}, pages = {2741--2748}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2010-Treeby-JASA.pdf doi:10.1121/1.3377056 Close
71.	B. E. Treeby, E. Z. Zhang, B. T. Cox Photoacoustic tomography in absorbing acoustic media using time reversal Journal Article In: Inverse Probl., 26 (11), pp. 115003, 2010. Links \| BibTeX @article{Treeby2010b, title = {Photoacoustic tomography in absorbing acoustic media using time reversal}, author = {B. E. Treeby and E. Z. Zhang and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2010-Treeby-INVPROB.pdf}, doi = {10.1088/0266-5611/26/11/115003}, year = {2010}, date = {2010-01-01}, journal = {Inverse Probl.}, volume = {26}, number = {11}, pages = {115003}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2010-Treeby-INVPROB.pdf doi:10.1088/0266-5611/26/11/115003 Close
72.	B. E. Treeby, B. T. Cox, E. Z. Zhang, S. K. Patch, P. C. Beard Measurement of broadband temperature-dependent ultrasonic attenuation and dispersion using photoacoustics Journal Article In: IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 56 (8), pp. 1666–1676, 2009. Links \| BibTeX @article{Treeby2009b, title = {Measurement of broadband temperature-dependent ultrasonic attenuation and dispersion using photoacoustics}, author = {B. E. Treeby and B. T. Cox and E. Z. Zhang and S. K. Patch and P. C. Beard}, url = {http://bug.medphys.ucl.ac.uk/papers/2009-Treeby-IEEETUFFC.pdf}, doi = {10.1109/TUFFC.2009.1231}, year = {2009}, date = {2009-07-31}, journal = {IEEE Trans. Ultrason. Ferroelectr. Freq. Control}, volume = {56}, number = {8}, pages = {1666--1676}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2009-Treeby-IEEETUFFC.pdf doi:10.1109/TUFFC.2009.1231 Close
73.	B. E. Treeby, J. Pan A practical examination of the errors arising in the direct collocation boundary element method for acoustic scattering Journal Article In: Eng. Anal. Bound. Elem., 33 (11), pp. 1302–1315, 2009. Links \| BibTeX @article{Treeby2009, title = {A practical examination of the errors arising in the direct collocation boundary element method for acoustic scattering}, author = {B. E. Treeby and J. Pan}, url = {http://bug.medphys.ucl.ac.uk/papers/2009-Treeby-EABE.pdf}, doi = {10.1016/j.enganabound.2009.06.005}, year = {2009}, date = {2009-07-25}, journal = {Eng. Anal. Bound. Elem.}, volume = {33}, number = {11}, pages = {1302--1315}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2009-Treeby-EABE.pdf doi:10.1016/j.enganabound.2009.06.005 Close
74.	B. E. Treeby, J. Pan, R. M. Paurobally The effect of hair on auditory localization cues Journal Article In: J. Acoust. Soc. Am., 122 (6), pp. 3586–3597, 2007. Links \| BibTeX @article{Treeby2007d, title = {The effect of hair on auditory localization cues}, author = {B. E. Treeby and J. Pan and R. M. Paurobally}, url = {http://bug.medphys.ucl.ac.uk/papers/2007-Treeby-JASA-IV.pdf}, doi = {10.1121/1.2793607}, year = {2007}, date = {2007-12-01}, journal = {J. Acoust. Soc. Am.}, volume = {122}, number = {6}, pages = {3586--3597}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2007-Treeby-JASA-IV.pdf doi:10.1121/1.2793607 Close
75.	B. E. Treeby, J. Pan, R. M. Paurobally An experimental study of the acoustic impedance characteristics of human hair Journal Article In: J. Acoust. Soc. Am., 122 (4), pp. 2107–2117, 2007. Links \| BibTeX @article{Treeby2007c, title = {An experimental study of the acoustic impedance characteristics of human hair}, author = {B. E. Treeby and J. Pan and R. M. Paurobally}, url = {http://bug.medphys.ucl.ac.uk/papers/2007-Treeby-JASA-III.pdf}, doi = {10.1121/1.2773946}, year = {2007}, date = {2007-10-01}, journal = {J. Acoust. Soc. Am.}, volume = {122}, number = {4}, pages = {2107--2117}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2007-Treeby-JASA-III.pdf doi:10.1121/1.2773946 Close
76.	B. E. Treeby, J. Pan, R. M. Paurobally Acoustic scattering by a sphere with a hemispherically split boundary condition Journal Article In: J. Acoust. Soc. Am., 122 (1), pp. 46-57, 2007. Links \| BibTeX @article{Treeby2007b, title = {Acoustic scattering by a sphere with a hemispherically split boundary condition}, author = {B. E. Treeby and J. Pan and R. M. Paurobally}, url = {https://bug.medphys.ucl.ac.uk/papers/2007-Treeby-JASA-II.pdf}, doi = {10.1121/1.2736784}, year = {2007}, date = {2007-07-01}, journal = {J. Acoust. Soc. Am.}, volume = {122}, number = {1}, pages = {46-57}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close https://bug.medphys.ucl.ac.uk/papers/2007-Treeby-JASA-II.pdf doi:10.1121/1.2736784 Close
77.	B. E. Treeby, R. M. Paurobally, J. Pan The effect of impedance on interaural azimuth cues derived from a spherical head model Journal Article In: J. Acoust. Soc. Am., 121 (4), pp. 2217–2226, 2007. Links \| BibTeX @article{Treeby2007a, title = {The effect of impedance on interaural azimuth cues derived from a spherical head model}, author = {B. E. Treeby and R. M. Paurobally and J. Pan}, url = {http://bug.medphys.ucl.ac.uk/papers/2007-Treeby-JASA-I.pdf}, doi = {10.1121/1.2709868}, year = {2007}, date = {2007-04-01}, journal = {J. Acoust. Soc. Am.}, volume = {121}, number = {4}, pages = {2217--2226}, keywords = {}, pubstate = {published}, tppubtype = {article} } Close http://bug.medphys.ucl.ac.uk/papers/2007-Treeby-JASA-I.pdf doi:10.1121/1.2709868 Close

Conference Publications

1.	M. Roberts, E. Martin, M. D. Brown, B. T. Cox, B. E. Treeby Matching Layer Deposition for an Open-Source Ultrasound Tomography System: Inter-Element Variation in Frequency Response Conference 2022 IEEE International Ultrasonics Symposium (IUS), 2022. Links \| BibTeX @conference{2022-Roberts-IEEEIUS, title = {Matching Layer Deposition for an Open-Source Ultrasound Tomography System: Inter-Element Variation in Frequency Response}, author = {M. Roberts and E. Martin and M. D. Brown and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2022-Roberts-IEEEIUS.pdf}, doi = {10.1109/IUS54386.2022.9957739}, year = {2022}, date = {2022-10-10}, booktitle = {2022 IEEE International Ultrasonics Symposium (IUS)}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2022-Roberts-IEEEIUS.pdf doi:10.1109/IUS54386.2022.9957739 Close
2.	A. Stanziola, S. R. Arridge, B. T. Cox, B. E. Treeby A research framework for writing differentiable PDE discretizations in JAX Conference 35th Conference on Neural Information Processing Systems (NeurIPS 2021), 2021. Links \| BibTeX @conference{2021-Stanziola-NeurIPS, title = {A research framework for writing differentiable PDE discretizations in JAX}, author = {A. Stanziola and S. R. Arridge and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Stanziola-NeurIPS.pdf }, year = {2021}, date = {2021-11-09}, booktitle = {35th Conference on Neural Information Processing Systems (NeurIPS 2021)}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Stanziola-NeurIPS.pdf Close
3.	M. Roberts, E. Martin, M. D. Brown, B. T. Cox, B. E. Treeby Transducer Module Development for an Open-Source Ultrasound Tomography System Conference 2021 IEEE International Ultrasonics Symposium (IUS), 2021. Links \| BibTeX @conference{2021-Roberts-IEEEIUS, title = {Transducer Module Development for an Open-Source Ultrasound Tomography System}, author = {M. Roberts and E. Martin and M. D. Brown and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Roberts-IEEEIUS.pdf }, doi = {10.1109/IUS52206.2021.9593866}, year = {2021}, date = {2021-09-11}, booktitle = {2021 IEEE International Ultrasonics Symposium (IUS)}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Roberts-IEEEIUS.pdf doi:10.1109/IUS52206.2021.9593866 Close
4.	E. Martin, A. Hurrell, J. Choi, B. E. Treeby Quantifying the effects of standing waves within the skull for ultrasound mediated opening of the blood-brain-barrier Conference 2021 IEEE International Ultrasonics Symposium (IUS), 2021. Links \| BibTeX @conference{2021-Martin-IEEEIUS, title = {Quantifying the effects of standing waves within the skull for ultrasound mediated opening of the blood-brain-barrier}, author = {E. Martin and A. Hurrell and J. Choi and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Martin-IEEEIUS.pdf }, doi = {10.1109/IUS52206.2021.9593777}, year = {2021}, date = {2021-09-11}, booktitle = {2021 IEEE International Ultrasonics Symposium (IUS)}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Martin-IEEEIUS.pdf doi:10.1109/IUS52206.2021.9593777 Close
5.	F. Vaverka, B. E. Treeby, J. Jaros Performance Evaluation of Pseudospectral Ultrasound Simulations on a Cluster of Xeon Phi Accelerators Conference High Performance Computing in Science and Engineering. HPCSE 2019. Lecture Notes in Computer Science., 12456 , Springer, Cham, 2021. Links \| BibTeX @conference{2021-Vaverka-HPSCE, title = {Performance Evaluation of Pseudospectral Ultrasound Simulations on a Cluster of Xeon Phi Accelerators}, author = {F. Vaverka and B. E. Treeby and J. Jaros}, editor = {T. Kozubek and P. Arbenz and J. Jaros and L. Riha and J. Sistek and P. Tichy}, url = {http://bug.medphys.ucl.ac.uk/papers/2021-Vaverka-HPSCE.pdf}, doi = {10.1007/978-3-030-67077-1_6}, year = {2021}, date = {2021-01-08}, booktitle = {High Performance Computing in Science and Engineering. HPCSE 2019. Lecture Notes in Computer Science.}, volume = {12456}, pages = {99-115}, publisher = {Springer, Cham}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2021-Vaverka-HPSCE.pdf doi:10.1007/978-3-030-67077-1_6 Close
6.	M. Jaros, B. E. Treeby, P. S. Georgiou, J. Jaros k-Dispatch: A workflow management system for the automated execution of biomedical ultrasound simulations on remote computing resources Conference PASC '20: Proceedings of the Platform for Advanced Scientific Computing Conference, ACM, New York, NY, USA, 2020. Links \| BibTeX @conference{2020-Jaros-PASC, title = {k-Dispatch: A workflow management system for the automated execution of biomedical ultrasound simulations on remote computing resources}, author = {M. Jaros and B. E. Treeby and P. S. Georgiou and J. Jaros}, url = {http://bug.medphys.ucl.ac.uk/papers/2020-Jaros-PASC.pdf}, doi = {10.1145/3394277.3401854}, year = {2020}, date = {2020-07-01}, booktitle = {PASC '20: Proceedings of the Platform for Advanced Scientific Computing Conference}, publisher = {ACM}, address = {New York, NY, USA}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2020-Jaros-PASC.pdf doi:10.1145/3394277.3401854 Close
7.	M. Bakaric, B. Zeqiri, B. T. Cox, B. E. Treeby Test materials for characterising heating from HIFU devices using photoacoustic thermometry Conference Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing 2020, 11240 , 2020. Links \| BibTeX @conference{2020-Bakaric-SPIE, title = {Test materials for characterising heating from HIFU devices using photoacoustic thermometry}, author = {M. Bakaric and B. Zeqiri and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2020-Bakaric-SPIE.pdf}, doi = {10.1117/12.2542429}, year = {2020}, date = {2020-02-28}, booktitle = {Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing 2020}, volume = {11240}, pages = {112401D}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2020-Bakaric-SPIE.pdf doi:10.1117/12.2542429 Close
8.	M. Roberts, E. Martin, B. T. Cox, B. E. Treeby Progress towards an open-source, low-cost ultrasound computed tomography research system Conference The 2nd International Workshop on Medical Ultrasound Tomography (MUST 2019), KIT Press, 2019. Links \| BibTeX @conference{2019-Roberts-MUST, title = {Progress towards an open-source, low-cost ultrasound computed tomography research system}, author = {M. Roberts and E. Martin and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2019-Roberts-MUST.pdf}, year = {2019}, date = {2019-10-14}, booktitle = {The 2nd International Workshop on Medical Ultrasound Tomography (MUST 2019)}, pages = {63-76}, publisher = {KIT Press}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2019-Roberts-MUST.pdf Close
9.	L. Albelda Gimeno, E. Martin, O. Wright, B. E. Treeby Experimental assessment of skull aberration and transmission loss at 270 kHz for focused ultrasound stimulation of the primary visual cortex Conference IEEE International Ultrasonics Symposium, 2019. Links \| BibTeX @conference{2019-Albelda-Gimeno-IEEEIUS, title = {Experimental assessment of skull aberration and transmission loss at 270 kHz for focused ultrasound stimulation of the primary visual cortex}, author = {L. Albelda Gimeno and E. Martin and O. Wright and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2019-Albelda-Gimeno-IEEEIUS.pdf}, year = {2019}, date = {2019-10-07}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2019-Albelda-Gimeno-IEEEIUS.pdf Close
10.	M. Bakaric, A. Ivory, B. Zeqiri, B. T. Cox, B. E. Treeby Measurement of the temperature-dependent speed of sound and change in Gruneisen parameter of tissue-mimicking materials Conference IEEE International Ultrasonics Symposium, 2019. Links \| BibTeX @conference{2019-Bakaric-IEEEIUS, title = {Measurement of the temperature-dependent speed of sound and change in Gruneisen parameter of tissue-mimicking materials}, author = {M. Bakaric and A. Ivory and B. Zeqiri and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2019-Bakaric-IEEEIUS.pdf}, year = {2019}, date = {2019-10-07}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2019-Bakaric-IEEEIUS.pdf Close
11.	D. R. Ramasawmy, B. T. Cox, B. E. Treeby The influence of strain-optic coefficients on the transduction mechanism of planar glass etalon Fabry-Perot ultrasound sensors Conference IEEE International Ultrasonics Symposium, 2019. Links \| BibTeX @conference{2019-Ramasawmy-IEEEIUS, title = {The influence of strain-optic coefficients on the transduction mechanism of planar glass etalon Fabry-Perot ultrasound sensors}, author = {D. R. Ramasawmy and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2019-Ramasawmy-IEEEIUS.pdf}, year = {2019}, date = {2019-10-07}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2019-Ramasawmy-IEEEIUS.pdf Close
12.	F. Vaverka, B. E. Treeby, J. Jaros Evaluation of the suitability of Intel Xeon Phi clusters for the simulation of ultrasound wave propagation using pseudospectral methods Conference International Conference on Computational Science (ICCS 2019), LNCS, , 11538 , 2019. Links \| BibTeX @conference{2019-Vaverka-ICCS, title = {Evaluation of the suitability of Intel Xeon Phi clusters for the simulation of ultrasound wave propagation using pseudospectral methods}, author = {F. Vaverka and B. E. Treeby and J. Jaros}, editor = {J. Rodrigues}, url = {http://bug.medphys.ucl.ac.uk/papers/2019-Vaverka-ICCS.pdf}, doi = {10.1007/978-3-030-22744-9_45}, year = {2019}, date = {2019-06-08}, booktitle = {International Conference on Computational Science (ICCS 2019), LNCS, }, volume = {11538}, pages = {577-590}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2019-Vaverka-ICCS.pdf doi:10.1007/978-3-030-22744-9_45 Close
13.	B. T. Cox, B. E. Treeby Accurate time-varying sources in k-space pseudospectral time domain acoustic simulations Conference IEEE International Ultrasonics Symposium, 2018. Links \| BibTeX @conference{2018-Cox-IEEEIUS, title = {Accurate time-varying sources in k-space pseudospectral time domain acoustic simulations}, author = {B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Cox-IEEEIUS.pdf}, year = {2018}, date = {2018-10-22}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Cox-IEEEIUS.pdf Close
14.	B. E. Treeby, F. Vaverka, J. Jaros Performance and accuracy analysis of nonlinear k-Wave simulations using local domain decomposition with an 8-GPU server Conference Proc. Mtgs. Acoust., 34 , 2018. Links \| BibTeX @conference{2018-Treeby-ISNA, title = {Performance and accuracy analysis of nonlinear k-Wave simulations using local domain decomposition with an 8-GPU server}, author = {B. E. Treeby and F. Vaverka and J. Jaros}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Treeby-ISNA.pdf}, doi = {10.1121/2.0000883}, year = {2018}, date = {2018-10-22}, booktitle = {Proc. Mtgs. Acoust.}, volume = {34}, pages = {022002}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Treeby-ISNA.pdf doi:10.1121/2.0000883 Close
15.	V. Suomi, B. E. Treeby, J. Jaros, J. Saunavaara, A. Kiviniemi, R. Blanco The effect of tissue physiological variability on transurethral ultrasound therapy of the prostate Conference 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2018. Links \| BibTeX @conference{2018-Suomi-EMBC, title = {The effect of tissue physiological variability on transurethral ultrasound therapy of the prostate}, author = {V. Suomi and B. E. Treeby and J. Jaros and J. Saunavaara and A. Kiviniemi and R. Blanco}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Suomi-EMBC.pdf}, doi = {10.1109/EMBC.2018.8513548}, year = {2018}, date = {2018-07-18}, booktitle = {40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)}, pages = {5701-5704}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Suomi-EMBC.pdf doi:10.1109/EMBC.2018.8513548 Close
16.	K. Kadlubiak, J. Jaros, B. E. Treeby GPU-Accelerated Simulation of Elastic Wave Propagation Conference 2018 International Conference on High Performance Computing & Simulation (HPCS), IEEE, 2018. Links \| BibTeX @conference{2018-Kadlubiak-HPCS, title = {GPU-Accelerated Simulation of Elastic Wave Propagation}, author = {K. Kadlubiak and J. Jaros and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Kadlubiak-HPCS}, doi = {10.1109/HPCS.2018.00044}, year = {2018}, date = {2018-07-16}, booktitle = {2018 International Conference on High Performance Computing & Simulation (HPCS)}, pages = {188-195}, publisher = {IEEE}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Kadlubiak-HPCS doi:10.1109/HPCS.2018.00044 Close
17.	M. Cudova, B. E. Treeby, J. Jaros Design of HIFU treatment plans using an evolutionary strategy Conference Proceedings of the Genetic and Evolutionary Computation Conference (GECCO) Companion, 2018. Links \| BibTeX @conference{Cudova2018, title = {Design of HIFU treatment plans using an evolutionary strategy}, author = {M. Cudova and B. E. Treeby and J. Jaros}, url = {http://bug.medphys.ucl.ac.uk/papers/2018-Cudova-GECCO.pdf}, doi = {10.1145/3205651.3208268}, year = {2018}, date = {2018-07-15}, booktitle = {Proceedings of the Genetic and Evolutionary Computation Conference (GECCO) Companion}, pages = {1568-1575}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2018-Cudova-GECCO.pdf doi:10.1145/3205651.3208268 Close
18.	M. D. Brown, B. T. Cox, B. E. Treeby Investigating the effect of thickness and frequency spacing on multi-frequency acoustic kinoforms Conference IEEE International Ultrasonics Symposium, 2017. Links \| BibTeX @conference{Brown2017b, title = {Investigating the effect of thickness and frequency spacing on multi-frequency acoustic kinoforms}, author = {M. D. Brown and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Brown-IEEEIUS.pdf}, year = {2017}, date = {2017-09-07}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Brown-IEEEIUS.pdf Close
19.	S. Rajagopal, T. Sainsbury, B. E. Treeby, B. T. Cox Laser generated ultrasound sources using polymer nanocomposites for high frequency metrology Conference IEEE International Ultrasonics Symposium, 2017. Links \| BibTeX @conference{Rajagopal2017, title = {Laser generated ultrasound sources using polymer nanocomposites for high frequency metrology}, author = {S. Rajagopal and T. Sainsbury and B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Rajagopal-IEEEIUS.pdf}, year = {2017}, date = {2017-09-07}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Rajagopal-IEEEIUS.pdf Close
20.	E. S. Wise, J. L. Robertson, B. T. Cox, B. E. Treeby Staircase-free acoustic sources for grid-based models of wave propagation Conference IEEE International Ultrasonics Symposium, 2017. Links \| BibTeX @conference{Wise2017b, title = {Staircase-free acoustic sources for grid-based models of wave propagation}, author = {E. S. Wise and J. L. Robertson and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Wise-IEEEIUS.pdf}, year = {2017}, date = {2017-09-07}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Wise-IEEEIUS.pdf Close
21.	D. R. Ramasawmy, E. Martin, J. A. Guggenheim, B. T. Cox, B. E. Treeby Directivity of a planar hard-dielectric Fabry-Perot optical ultrasound sensor Conference IEEE International Ultrasonics Symposium, 2017. Links \| BibTeX @conference{Ramasawmy2017, title = {Directivity of a planar hard-dielectric Fabry-Perot optical ultrasound sensor}, author = {D. R. Ramasawmy and E. Martin and J. A. Guggenheim and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2017-Ramasawmy-IEEEIUS.pdf}, year = {2017}, date = {2017-09-07}, booktitle = { IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2017-Ramasawmy-IEEEIUS.pdf Close
22.	M. D. Brown, E. Martin, B. T. Cox, B. E. Treeby Single pulse illumination of multi-layer photoacoustic holograms for patterned ultrasound field generation Conference IEEE International Ultrasonics Symposium, 2016. Links \| BibTeX @conference{Brown2016b, title = {Single pulse illumination of multi-layer photoacoustic holograms for patterned ultrasound field generation}, author = {M. D. Brown and E. Martin and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2016-Brown-IEEEIUS.pdf}, year = {2016}, date = {2016-09-19}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2016-Brown-IEEEIUS.pdf Close
23.	V. Suomi, J. Jaros, B. E. Treeby, R. Cleveland Nonlinear 3-D simulation of high-intensity focused ultrasound therapy in the kidney Conference IEEE 38th Annual International Conference of the Engineering in Medicine and Biology Society (EMBC), 2016. Links \| BibTeX @conference{Suomi2016, title = {Nonlinear 3-D simulation of high-intensity focused ultrasound therapy in the kidney}, author = {V. Suomi and J. Jaros and B. E. Treeby and R. Cleveland}, url = {http://bug.medphys.ucl.ac.uk/papers/2016-Suomi-IEEEEMBC.pdf}, doi = { 10.1109/EMBC.2016.7592008}, year = {2016}, date = {2016-08-16}, booktitle = {IEEE 38th Annual International Conference of the Engineering in Medicine and Biology Society (EMBC)}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2016-Suomi-IEEEEMBC.pdf doi: 10.1109/EMBC.2016.7592008 Close
24.	M. Perez Liva, J. L. Herraiz, J. M Udias, B. T. Cox, B. E. Treeby Full-wave attenuation reconstruction in the time domain for ultrasound computed tomography Conference IEEE 13th International Symposium on Biomedical Imaging (ISBI), 2016. Links \| BibTeX @conference{PerezLiva2016, title = {Full-wave attenuation reconstruction in the time domain for ultrasound computed tomography}, author = {M. {Perez Liva} and J. L. Herraiz and J. M Udias and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2016-PerezLiva-ISBI.pdf}, doi = {10.1109/ISBI.2016.7493365}, year = {2016}, date = {2016-04-13}, booktitle = {IEEE 13th International Symposium on Biomedical Imaging (ISBI)}, pages = {710 - 713}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2016-PerezLiva-ISBI.pdf doi:10.1109/ISBI.2016.7493365 Close
25.	B. E. Treeby, J. Jaros, B. T. Cox Advanced photoacoustic image reconstruction using the k-Wave toolbox Conference Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 9708 , 2016. Links \| BibTeX @conference{Treeby2016, title = {Advanced photoacoustic image reconstruction using the k-Wave toolbox}, author = {B. E. Treeby and J. Jaros and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2016-Treeby-SPIE.pdf}, doi = {10.1117/12.2209254}, year = {2016}, date = {2016-03-18}, booktitle = {Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing}, volume = {9708}, pages = {97082P}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2016-Treeby-SPIE.pdf doi:10.1117/12.2209254 Close
26.	M. Perez Liva, J. L. Herraiz, L. Medina Valdes, J. Camacho, C. Fritsch, B. E. Treeby, J. M Udias Regularization of image reconstruction in ultrasound computed tomography Conference IEEE Nuclear Science Symposium and Medical Imaging Conference, 2015. Links \| BibTeX @conference{PerezLiva2015, title = {Regularization of image reconstruction in ultrasound computed tomography}, author = {M. {Perez Liva} and J. L. Herraiz and L. {Medina Valdes} and J. Camacho and C. Fritsch and B. E. Treeby and J. M Udias}, url = {http://bug.medphys.ucl.ac.uk/papers/2015-PerezLiva-IEEENSSMSC.pdf}, doi = {10.1109/NSSMIC.2015.7582217}, year = {2015}, date = {2015-10-31}, booktitle = {IEEE Nuclear Science Symposium and Medical Imaging Conference}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2015-PerezLiva-IEEENSSMSC.pdf doi:10.1109/NSSMIC.2015.7582217 Close
27.	Y. T. Ling, E. Martin, B. E. Treeby Discrete source model for simulating bowl-shaped focused ultrasound transducers on regular grids: Design and experimental validation Conference IEEE International Ultrasonics Symposium, 2015. Links \| BibTeX @conference{Ling2015, title = {Discrete source model for simulating bowl-shaped focused ultrasound transducers on regular grids: Design and experimental validation}, author = {Y. T. Ling and E. Martin and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2015-Ling-IEEEIUS.pdf}, doi = {10.1109/ULTSYM.2015.0281}, year = {2015}, date = {2015-10-21}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2015-Ling-IEEEIUS.pdf doi:10.1109/ULTSYM.2015.0281 Close
28.	E. Martin, E. Z. Zhang, P. C. Beard, B. E. Treeby Rapid spatial mapping of the acoustic pressure in high intensity focused ultrasound fields at clinical intensities using a novel planar Fabry-Perot interferometer Conference IEEE International Ultrasonics Symposium, 2015. Links \| BibTeX @conference{Martin2015, title = {Rapid spatial mapping of the acoustic pressure in high intensity focused ultrasound fields at clinical intensities using a novel planar Fabry-Perot interferometer}, author = {E. Martin and E. Z. Zhang and P. C. Beard and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2015-Martin-IEEEIUS.pdf}, doi = {10.1109/ULTSYM.2015.0229}, year = {2015}, date = {2015-10-21}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2015-Martin-IEEEIUS.pdf doi:10.1109/ULTSYM.2015.0229 Close
29.	B. E. Treeby, T. Saratoon The contribution of shear wave absorption to ultrasound heating in bones: Coupled elastic and thermal modeling Conference IEEE International Ultrasonics Symposium, 2015. Links \| BibTeX @conference{Treeby2015, title = {The contribution of shear wave absorption to ultrasound heating in bones: Coupled elastic and thermal modeling}, author = {B. E. Treeby and T. Saratoon}, url = {http://bug.medphys.ucl.ac.uk/papers/2015-Treeby-IEEEIUS.pdf}, doi = {10.1109/ULTSYM.2015.0296}, year = {2015}, date = {2015-10-21}, booktitle = {IEEE International Ultrasonics Symposium}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2015-Treeby-IEEEIUS.pdf doi:10.1109/ULTSYM.2015.0296 Close
30.	E. S. Wise, B. T. Cox, B. E. Treeby A monitor function for spectral moving mesh methods applied to nonlinear acoustics Conference International Symposium on Nonlinear Acoustics (AIP Conference Proceedings), 1685 , 2015. Links \| BibTeX @conference{Wise2015, title = {A monitor function for spectral moving mesh methods applied to nonlinear acoustics}, author = {E. S. Wise and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2015-Wise-ISNA.pdf}, doi = {10.1063/1.4934446}, year = {2015}, date = {2015-06-29}, booktitle = {International Symposium on Nonlinear Acoustics (AIP Conference Proceedings)}, volume = {1685}, pages = {070009 }, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2015-Wise-ISNA.pdf doi:10.1063/1.4934446 Close
31.	E. Martin, B. E. Treeby Experimental validation of computational models for large-scale nonlinear ultrasound simulations in heterogeneous, absorbing fluid media Conference International Symposium on Nonlinear Acoustics (AIP Conference Proceedings), 1685 , 2015. Links \| BibTeX @conference{Martin2015a, title = {Experimental validation of computational models for large-scale nonlinear ultrasound simulations in heterogeneous, absorbing fluid media}, author = {E. Martin and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2015-Martin-ISNA.pdf}, doi = {10.1063/1.4934444}, year = {2015}, date = {2015-06-29}, booktitle = {International Symposium on Nonlinear Acoustics (AIP Conference Proceedings)}, volume = {1685}, pages = {070007}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2015-Martin-ISNA.pdf doi:10.1063/1.4934444 Close
32.	J. Jaros, V. Nikl, B. E. Treeby Large-scale ultrasound simulations using the hybrid OpenMP/MPI decomposition Conference Proceedings of the 3rd International Conference on Exascale Applications and Software, 2015, ISBN: 978-0-9926615-1-9. Links \| BibTeX @conference{Jaros2015, title = {Large-scale ultrasound simulations using the hybrid OpenMP/MPI decomposition}, author = {J. Jaros and V. Nikl and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2015-Jaros-EASC.pdf}, isbn = {978-0-9926615-1-9}, year = {2015}, date = {2015-04-21}, booktitle = {Proceedings of the 3rd International Conference on Exascale Applications and Software}, pages = {115--119}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2015-Jaros-EASC.pdf Close
33.	M. D. Brown, T. J. Allen, B. T. Cox, B. E. Treeby Control of optically generated ultrasound fields using binary amplitude holograms Conference IEEE International Ultrasonics Symposium, 2014. Links \| BibTeX @conference{Brown2014, title = {Control of optically generated ultrasound fields using binary amplitude holograms}, author = {M. D. Brown and T. J. Allen and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2014-Brown-IEEEIUS.pdf}, doi = {10.1109/ULTSYM.2014.0254}, year = {2014}, date = {2014-09-03}, booktitle = {IEEE International Ultrasonics Symposium}, pages = {1037--1040}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2014-Brown-IEEEIUS.pdf doi:10.1109/ULTSYM.2014.0254 Close
34.	J. L. Robertson, B. T. Cox, B. E. Treeby Quantifying numerical errors in the simulation of transcranial ultrasound using pseudospectral methods Conference IEEE International Ultrasonics Symposium, 2014. Links \| BibTeX @conference{Robertson2014, title = {Quantifying numerical errors in the simulation of transcranial ultrasound using pseudospectral methods}, author = {J. L. Robertson and B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2014-Robertson-IEEEIUS.pdf}, doi = {10.1109/ULTSYM.2014.0498}, year = {2014}, date = {2014-09-03}, booktitle = {IEEE International Ultrasonics Symposium}, pages = {2000-2003}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2014-Robertson-IEEEIUS.pdf doi:10.1109/ULTSYM.2014.0498 Close
35.	L. Demi, B. E. Treeby, M. D. Verweij Comparison between two different full-wave methods for the computation of nonlinear ultrasound fields in inhomogeneous and attenuating tissue Conference IEEE International Ultrasonics Symposium, 2014. Links \| BibTeX @conference{Demi2014, title = {Comparison between two different full-wave methods for the computation of nonlinear ultrasound fields in inhomogeneous and attenuating tissue}, author = {L. Demi and B. E. Treeby and M. D. Verweij}, url = {http://bug.medphys.ucl.ac.uk/papers/2014-Demi-IEEEIUS.pdf}, doi = {10.1109/ULTSYM.2014.0362}, year = {2014}, date = {2014-09-03}, booktitle = {IEEE International Ultrasonics Symposium}, pages = {1464--1467}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2014-Demi-IEEEIUS.pdf doi:10.1109/ULTSYM.2014.0362 Close
36.	B. E. Treeby, J. Jaros, D. Rohrbach, B. T. Cox Modelling elastic wave propagation using the k-Wave MATLAB toolbox Conference IEEE International Ultrasonics Symposium, 2014. Links \| BibTeX @conference{Treeby2014a, title = {Modelling elastic wave propagation using the k-Wave MATLAB toolbox}, author = {B. E. Treeby and J. Jaros and D. Rohrbach and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2014-Treeby-IEEEIUS.pdf}, doi = {10.1109/ULTSYM.2014.0037}, year = {2014}, date = {2014-09-03}, booktitle = {IEEE International Ultrasonics Symposium}, pages = {146--149}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2014-Treeby-IEEEIUS.pdf doi:10.1109/ULTSYM.2014.0037 Close
37.	E. S. Wise, B. E. Treeby Full-wave nonlinear ultrasound simulation in an axisymmetric coordinate system using the discrete sine and cosine transforms Conference IEEE International Ultrasonics Symposium, 2013. Links \| BibTeX @conference{Wise2013, title = {Full-wave nonlinear ultrasound simulation in an axisymmetric coordinate system using the discrete sine and cosine transforms}, author = {E. S. Wise and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2013-Wise-IEEEIUS.pdf}, doi = {10.1109/ULTSYM.2013.0349}, year = {2013}, date = {2013-07-21}, booktitle = {IEEE International Ultrasonics Symposium}, pages = {1374-1377}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2013-Wise-IEEEIUS.pdf doi:10.1109/ULTSYM.2013.0349 Close
38.	B. E. Treeby, B. T. Cox A computationally efficient elastic wave model for media with power-law absorption Conference IEEE International Ultrasonics Symposium, 2013. Links \| BibTeX @conference{Treeby2013, title = {A computationally efficient elastic wave model for media with power-law absorption}, author = {B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2013-Treeby-IEEEIUS.pdf}, doi = {10.1109/ULTSYM.2013.0266}, year = {2013}, date = {2013-07-21}, booktitle = {IEEE International Ultrasonics Symposium}, pages = {1037--1040}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2013-Treeby-IEEEIUS.pdf doi:10.1109/ULTSYM.2013.0266 Close
39.	T. Oruganti, J. Laufer, B. E. Treeby Vessel filtering of photoacoustic images Conference Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 8581 , 2013. Links \| BibTeX @conference{Oruganti2013, title = {Vessel filtering of photoacoustic images}, author = {T. Oruganti and J. Laufer and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2013-Oruganti-SPIE.pdf}, doi = {10.1117/12.2005988}, year = {2013}, date = {2013-03-04}, booktitle = {Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing}, volume = {8581}, pages = {85811W}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2013-Oruganti-SPIE.pdf doi:10.1117/12.2005988 Close
40.	N. Nandapalan, J. Jaros, A. P. Rendell, B. E. Treeby Implementation of 3D FFTs across multiple GPUs in shared memory environments Conference 13th International Conference on Parallel and Distributed Computing, Applications and Technologies (PDCAT), 2012. Links \| BibTeX @conference{Nandapalan2012, title = {Implementation of 3D FFTs across multiple GPUs in shared memory environments}, author = {N. Nandapalan and J. Jaros and A. P. Rendell and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2012-Nandapalan-PDCAT.pdf}, doi = {10.1109/PDCAT.2012.79}, year = {2012}, date = {2012-12-14}, booktitle = {13th International Conference on Parallel and Distributed Computing, Applications and Technologies (PDCAT)}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2012-Nandapalan-PDCAT.pdf doi:10.1109/PDCAT.2012.79 Close
41.	K. Wang, E. Teoh, J. Jaros, B. E. Treeby Modelling nonlinear ultrasound propagation in absorbing media using the k-Wave toolbox: Experimental validation Conference IEEE International Ultrasonics Symposium, 2012. Links \| BibTeX @conference{Wang2012, title = {Modelling nonlinear ultrasound propagation in absorbing media using the k-Wave toolbox: Experimental validation}, author = {K. Wang and E. Teoh and J. Jaros and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2012-Wang-IEEEIUS.pdf}, doi = {10.1109/ULTSYM.2012.0130}, year = {2012}, date = {2012-10-07}, booktitle = {IEEE International Ultrasonics Symposium}, pages = {523--526}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2012-Wang-IEEEIUS.pdf doi:10.1109/ULTSYM.2012.0130 Close
42.	A. Haigh, B. E. Treeby, E. McCreath Ultrasound simulation on the cell broadband engine using the Westervelt equation Conference 12th International Conference on Algorithms and Architectures for Parallel Processing, Part 1, LNCS, 7439 , 2012. Links \| BibTeX @conference{Haigh2012, title = {Ultrasound simulation on the cell broadband engine using the Westervelt equation}, author = {A. Haigh and B. E. Treeby and E. McCreath}, url = {http://bug.medphys.ucl.ac.uk/papers/2012-Haigh-ICA3PP.pdf}, doi = {10.1007/978-3-642-33078-0_18}, year = {2012}, date = {2012-09-04}, booktitle = {12th International Conference on Algorithms and Architectures for Parallel Processing, Part 1, LNCS}, volume = {7439}, pages = {241--252}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2012-Haigh-ICA3PP.pdf doi:10.1007/978-3-642-33078-0_18 Close
43.	J. Jaros, B. E. Treeby, A. P. Rendell Use of multiple GPUs on shared memory multiprocessors for ultrasound propagation simulations Conference 10th Australasian Symposium on Parallel and Distributed Computing, 127 , 2012, ISBN: 978-1-921770-08-1. Links \| BibTeX @conference{Jaros2012, title = {Use of multiple GPUs on shared memory multiprocessors for ultrasound propagation simulations}, author = {J. Jaros and B. E. Treeby and A. P. Rendell}, url = {http://bug.medphys.ucl.ac.uk/papers/2012-Jaros-AUSPDC.pdf}, isbn = {978-1-921770-08-1}, year = {2012}, date = {2012-01-30}, booktitle = {10th Australasian Symposium on Parallel and Distributed Computing}, volume = {127}, pages = {43--52}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2012-Jaros-AUSPDC.pdf Close
44.	B. E. Treeby, M. Tumen, B. T. Cox Time domain simulation of harmonic ultrasound images and beam patterns in 3D using the k-space pseudospectral method Conference 14th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Part I, LNCS, 6891 , 2011. Links \| BibTeX @conference{Treeby2011e, title = {Time domain simulation of harmonic ultrasound images and beam patterns in 3D using the k-space pseudospectral method}, author = {B. E. Treeby and M. Tumen and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2011-Treeby-MICCAI.pdf}, doi = {10.1007/978-3-642-23623-5_46}, year = {2011}, date = {2011-09-18}, booktitle = {14th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Part I, LNCS}, volume = {6891}, pages = {363--370}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2011-Treeby-MICCAI.pdf doi:10.1007/978-3-642-23623-5_46 Close
45.	J. Laufer, P. Johnson, E. Z. Zhang, B. E. Treeby, B. T. Cox, R. B. Pedley, P. C. Beard In vivo longitudinal photoacoustic imaging of subcutaneous tumours in mice Conference Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7899 , 2011. Links \| BibTeX @conference{Laufer2011, title = {In vivo longitudinal photoacoustic imaging of subcutaneous tumours in mice}, author = {J. Laufer and P. Johnson and E. Z. Zhang and B. E. Treeby and B. T. Cox and R. B. Pedley and P. C. Beard}, url = {http://bug.medphys.ucl.ac.uk/papers/2011-Laufer-SPIE.pdf}, doi = {10.1117/12.876782}, year = {2011}, date = {2011-02-28}, booktitle = {Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing}, volume = {7899}, pages = {789915 }, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2011-Laufer-SPIE.pdf doi:10.1117/12.876782 Close
46.	B. E. Treeby, J. Laufer, E. Z. Zhang, F. C. Norris, M. F. Lythgoe, P. C. Beard, B. T. Cox Acoustic attenuation compensation in photoacoustic tomography: Application to high resolution 3D imaging of vascular networks in mice Conference Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7899 , 2011. Links \| BibTeX @conference{Treeby2011d, title = {Acoustic attenuation compensation in photoacoustic tomography: Application to high resolution 3D imaging of vascular networks in mice}, author = {B. E. Treeby and J. Laufer and E. Z. Zhang and F. C. Norris and M. F. Lythgoe and P. C. Beard and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2011-Treeby-SPIE.pdf}, doi = {10.1117/12.874530}, year = {2011}, date = {2011-02-22}, booktitle = {Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing}, volume = {7899}, pages = {78992Y }, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2011-Treeby-SPIE.pdf doi:10.1117/12.874530 Close
47.	B. T. Cox, B. E. Treeby Effect of sensor directionality on photoacoustic imaging: a study using the k-Wave toolbox Conference Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7564 , 2010. Links \| BibTeX @conference{Cox2010, title = {Effect of sensor directionality on photoacoustic imaging: a study using the k-Wave toolbox}, author = {B. T. Cox and B. E. Treeby}, url = {http://bug.medphys.ucl.ac.uk/papers/2010-Cox-SPIE.pdf}, doi = {10.1117/12.841671}, year = {2010}, date = {2010-02-23}, booktitle = {Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing}, volume = {7564}, pages = {75640I}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2010-Cox-SPIE.pdf doi:10.1117/12.841671 Close
48.	B. E. Treeby, B. T. Cox Fast, tissue-realistic models of photoacoustic wave propagation for homogeneous attenuating media Conference Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing, 7177 , 2009. Links \| BibTeX @conference{Treeby2009c, title = {Fast, tissue-realistic models of photoacoustic wave propagation for homogeneous attenuating media}, author = {B. E. Treeby and B. T. Cox}, url = {http://bug.medphys.ucl.ac.uk/papers/2009-Treeby-SPIE.pdf}, doi = {10.1117/12.806794}, year = {2009}, date = {2009-02-12}, booktitle = {Proc. SPIE, Photons Plus Ultrasound: Imaging and Sensing}, volume = {7177}, pages = {717716}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2009-Treeby-SPIE.pdf doi:10.1117/12.806794 Close
49.	B. E. Treeby, R. M. Paurobally, J. Pan Decomposition of the HRTF from a sphere with neck and hair Conference Proceedings of the 13th International Conference on Auditory Display, 2007. Links \| BibTeX @conference{Treeby2007e, title = {Decomposition of the HRTF from a sphere with neck and hair}, author = {B. E. Treeby and R. M. Paurobally and J. Pan}, url = {http://bug.medphys.ucl.ac.uk/papers/2007-Treeby-ICAD.pdf}, year = {2007}, date = {2007-06-26}, booktitle = {Proceedings of the 13th International Conference on Auditory Display}, pages = {79--84}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2007-Treeby-ICAD.pdf Close
50.	B. E. Treeby, R. M. Paurobally, J. Pan Investigation of the effect of impedance on azimuth cues derived from spherical head models Conference Proceedings of the 12th International Conference on Auditory Display, 2006, ISBN: 0-902-23820-5. Links \| BibTeX @conference{Treeby2006, title = {Investigation of the effect of impedance on azimuth cues derived from spherical head models}, author = {B. E. Treeby and R. M. Paurobally and J. Pan}, url = {http://bug.medphys.ucl.ac.uk/papers/2006-Treeby-ICAD.pdf}, isbn = {0-902-23820-5}, year = {2006}, date = {2006-06-20}, booktitle = {Proceedings of the 12th International Conference on Auditory Display}, pages = {223--226}, keywords = {}, pubstate = {published}, tppubtype = {conference} } Close http://bug.medphys.ucl.ac.uk/papers/2006-Treeby-ICAD.pdf Close